Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi190g00038 ATGGCGAGAAGATCTCCTCCTGTGGTTAACGAGACAGGTTGCACGTGGCGAATGTTTGGAATCTTTAATTCTCGTGATGGCCATTCCGACAGAAGATTGGTTTCTAATAGGAGCCATTCCCGTTTGCTTACACATTCCACTGCTACAGGAAATGGAAACTCGAGAAGCAGCTCAGATGTGCTTAGCAGAATTGATGAAAAGTACCCTCACATTGGTGTAAGTTCCAGAAGAAGAAGGAATTATGGTTGTAAAAGTATCAGCTGCGTGGAGAATGATCAGGTAGCAGATTGGGGGAATGAAGTGACAAAGATGATTGTTGATCAGAGAATTTTCAATAAAAATTATCAAGGTAAAGATGGGGCAGGCTATAAGCCTGACCAATTCTTGGATGCTTTACAGGTTTTATATTCAAACAAGGAGCTTTTTGTAAAACTTCTGCAAGATCCAAACTCTCTGTTAGCAAAACAGATTCATGAGTTGCAGAGTTCTCAAGTGACAGAACCATATCAGGCAAGGCAAAAAAGGATGAACAGATTGAATAAATCTCAAAACAGTAATGCTAGAAAAAGTGTAAAAAATTTCAATTCCTCTGATAGATATCATTCAAGTTGTGAGCCTCAGTCCTCAGAAAGAATAGTAGTTTTGAAGCCTAGCACAACTAGCTGTGACTGTCCTAGGCCTCACTCTTCTAGTAGCTTCAGTCACAATGCTCAAAATATCAAGCCTTCAAATTTTCCTTTTGGTCGTATAAAGAGAAAGTTAAGGCATGTCATGAGTGAAATGAGTAAAGATCAACAGCAGCGGAGGACTGCTGCTGGAGTGCCATGTGAATTTCCTTGCGGTGGTAAAGAAGTAAAAGAATTGGAAATTGCTGGAAGAAATTCACCAATTAACAGGTTGAAAAATTCTGAGTCATGTATGGGACAGGAAGCTGCTTCATTTGGTGAAAGTTGCAGTAACAACACAAATAACACTTCACTAAGCCCTTCTGAGCAAAACACATTGAACATACATGATGAAGATAACAAAAGTCCATCTCAGATGTTAAACTGTGAAATTGAGGAATGTAAACAGTGCACAAACTCTCTAGTCAGAACAATTCCTCTTCCTGACACTGAAAGGATGATAGATCATAACAACGATCAAATGGTCCTCAGAACCAAGTTGGGGCTTCAGAAAGATGAGAAAAATTATTCCTTTAGTTCTTCTGGTCAGAAATTCAAGGATCCATCAGTGGTCACTGTTAATACACTTGGTGATGAGTTGCAGCTTTTTGGTGCAGATGTTAGTACAAGAAGGAGTTTTCCTTGCGACAATTTGCATGCACATTATGACATTCCTACAGATTGCGGATATACAAATGAAAGTCCTACTCAGAACTTTGACATCACAACTGGAGGACTTGGATCTTTTCTGGATTCACATCAAGAGATCCAGACTTTGTCCTTTTCATCAGATGCTGCTTCATCCTGTCAGAGAATAGAAGATGAAGATGATGTCACTAATCCTCCAATAGCCATCTTTCAACCAGATGAGTCACCAGTGCAAGTTAAACATGAAAAGTTTGAAGAAAACTATTTTGCAGACCTTATAAGATCCTCTTTGGATCCAATAAACAAGTTAACCTCTTCCAAGGACATGTTAGACTACTTCAGGGAAATTGTGCAGGCTTTTACCTTGAAATGGGATGAACTTACTATGAAGAGTGCTTCATCTGACCTATTGATGGATTCATCCACCTTTGATGAACTGAAGGGATTAACTGGCCCTAAAATCTTGCATGACTGTAGCATTGAAATTTTCATGAAGGTATACCAGAACTGTTGTTTCTCACCTCATCCAAATGTCGAAGCATATGTTGTAAAAAATGTTCTGGCTAAAGAGATTGCAGAACTGGTTAACTTGCACTTTCTCCCTCGTCCATCACCAATAACGTTGCAACAGCTTGTTGAAAAGGACTTAGCAAAACGTGGATCATGGCTAAATATCCAAGTTGATACAGAAGACATTGCAATAGAGATGGAGAAAGATATTCTGGAAAAACTGGTATTGGAAATAGCATCTGAGATGGATCATAAAGCACTTTGGTAG 2091 0.3912 MARRSPPVVNETGCTWRMFGIFNSRDGHSDRRLVSNRSHSRLLTHSTATGNGNSRSSSDVLSRIDEKYPHIGVSSRRRRNYGCKSISCVENDQVADWGNEVTKMIVDQRIFNKNYQGKDGAGYKPDQFLDALQVLYSNKELFVKLLQDPNSLLAKQIHELQSSQVTEPYQARQKRMNRLNKSQNSNARKSVKNFNSSDRYHSSCEPQSSERIVVLKPSTTSCDCPRPHSSSSFSHNAQNIKPSNFPFGRIKRKLRHVMSEMSKDQQQRRTAAGVPCEFPCGGKEVKELEIAGRNSPINRLKNSESCMGQEAASFGESCSNNTNNTSLSPSEQNTLNIHDEDNKSPSQMLNCEIEECKQCTNSLVRTIPLPDTERMIDHNNDQMVLRTKLGLQKDEKNYSFSSSGQKFKDPSVVTVNTLGDELQLFGADVSTRRSFPCDNLHAHYDIPTDCGYTNESPTQNFDITTGGLGSFLDSHQEIQTLSFSSDAASSCQRIEDEDDVTNPPIAIFQPDESPVQVKHEKFEENYFADLIRSSLDPINKLTSSKDMLDYFREIVQAFTLKWDELTMKSASSDLLMDSSTFDELKGLTGPKILHDCSIEIFMKVYQNCCFSPHPNVEAYVVKNVLAKEIAELVNLHFLPRPSPITLQQLVEKDLAKRGSWLNIQVDTEDIAIEMEKDILEKLVLEIASEMDHKALW 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi190g00038 696 Pfam Protein of unknown function (DUF3741) 108 151 IPR022212 -
Sebi190g00038 696 Pfam Domain of unknown function (DUF4378) 549 685 IPR025486 -
Sebi190g00038 696 MobiDBLite consensus disorder prediction 29 61 - -
Sebi190g00038 696 MobiDBLite consensus disorder prediction 39 59 - -
Sebi190g00038 696 MobiDBLite consensus disorder prediction 165 243 - -
Sebi190g00038 696 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 75 - -
Sebi190g00038 696 MobiDBLite consensus disorder prediction 165 245 - -
Sebi190g00038 696 MobiDBLite consensus disorder prediction 319 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi190g00038 Sebi-Chr190 559686 562997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi190g00038 498 688 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 28.358 3.30e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi190g00038 - - gmx:100813885 779.245