Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi190g00033 ATGCCGTCATGGTGGGGAAAGTCTCCATCCAAAGAGGTGAATAGGAAGGCAAATAGGGAAAGTATTCTTGATACAATACAACGGAAATTAAAGAATGCTTCTGAAGAGAAGCGCAACAACAAATCAGGAGGATCAAGGAGACATCATAGTGGCGCTATCCCAGAGAAGGGATCTAAATCCATCATACCTTCAAGATCACCATCACCCTCTATGCATGGCTCTAAACCATCTATATATTGTCCTCTACCAAAACCTGGTTATGTATCTAACAGGGGAGATCCGACAGATGCTGAAGGAGATATAGCCACTGCATCTGTTTCCAGTGATAGCTCTATTGACAGTGGTGACTCAGCTGATTCACAACTTGTTAGTCCTCTGGAATCCGACTGTGAAAATGGAAACAGAGCCACTATTAATAGTTCATTTAGGGTGGTGCACAAGGATCAATTGACTGTTATACAAAGAAACTCAAGAGTATCCTCAAAACCAGCTCCTCAGTTGTGCAATAATAAGCTTTTATATACATCAGCAAGAGGGGTTCCCTTGCATCTGCAAAATCTGCAAATAGCTCGTCCAGGTGGATTGTGCAGTGCTCCAAATAGTTTAATGTCAAGTCCTTCTAGAAGTCCAATGAGAGCATTTGGTCCTGAGCAAGTGTTGAACTCTGGATTCTGCACAGGAAAGCTTTATCCAGATATAGCTTCTGGGCACTGCTCTAGTCCTGGTTCATGCCATAATTCTAGCCATAAATCAGTTGGTGAGGATCCGTCACGACAGATATTTTGTCCACACAACCGGTGTAGCCCTGAGTGTTCTCCAATACCTAGTCCCAGAATAACAAGCTCAGGTCCTAGTTCCAGGATACAGAGTGGTACTGTCACTCCTCTGCATCCACAAGTTGGATGTGCTGTAGCAGAATCACCAAGAAGACGTCCTGACGATGTGAAAAAACAATCTCACCGTTTACCACTTCCTCCAATAACAGTCACTAAATCTCGTCCATTTTCTCCAACCTATTCTGCATCCACAACTCCCACCCCTCGTAGTCCTGCCCGAGCAGAAAATCTAACAAGCCCAAGTTCACGCTGGAAGAAGGGGCAGTTGCTTGGAAGGGGAACATTTGGGCATGTATATCTTGGTTTTAACAGAGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACCCTTTTCTCAGATGATGCTAAATCAAGGGAATGTGCGCAGCAACTTGGCCAAGAAATTGCATTGCTAAGTCGGTTGCGGCATCCAAATATAGTCCAATACTATGGATCTGAGGAGGTAGATGACAAGCTTTATATATACTTGGAGTATGTCTCTGGTGGGTCAATCTATAAACTAGTTCAAGAATATGGCCAATTGGGTGAAATTGCTATTCGTAATTACACTCGGCAAATTCTGTCTGGGCTTGCATATTTACATGCTAAGAACACTGTTCACAGGGACATCAAAGGAGCAAACATATTGGTGGATCCTAATGGAAGGATAAAATTAGCAGATTTTGGGATGGCAAAGCATATTAGTGGCGAGTCTTGTCCATTTTCTTTCAAAGGAAGTCCATATTGGATGGCACCTGAGGTTATAAAAAATTCAAATGGTTGTAATCTTGCTGTTGATATTTGGAGTCTGGGATGCACTGTTTTGGAGATGGCAACAACAAAACCTCCTTGGAGCCAGTATGAAGGGGTTGCTGCTCTGTTTAAGATTGGGAACAGCAAGGAACTTCCTACTATTCCAGCTCATCTATCAGAAGAGGGAAAAGATTTTGTCAGGCTTTGTTTGCAAAGGAATCCACTAAATCGTCCCTCAGCTGGTCAACTTTTAGAGCATCCATTTGTAAAAAATGCTATGCTGGAAAGACACATTTTGACTGCTTCTCCTTCAGAAGCACCAGCCGCTATTATAAATGCAGTGAGATCTCTGGCCATTGGACCTGCAAAACCTAATTTATGCTTAGACTCGGAAGTGGCTGGTATCTGTCCGTCTAGAAGCTTGAGAGCTGTTTCTGGATCAAGTGATGCACATACACCAAGGAACTTGTCGTGTCCCATTTCTCCCTCTAGGAGCCTACCTTTGCCTTCTAGATCATTGCATGCGAGTGGAAGGATGTCTCCCTCTCCGATATCTAGTCCCCATACTGCATCTGGCTCATCTACACCGCTCACCAGTGGTGGTGGTGCTATCCCATTTCATCTAACAAAGCAACCAATACTCTCATATGAAGATGTGGGTATGATCCAAAAGTCTCAGAATGGCTTATATTCAAGTGGAAACACTGCCTATCTGGGTTCAGGGAGAAAAACGCAAACTACACATGCTTGCCGGGATATAGCTTCATCTGATAATGACATTCTTGCAAACCATGATAAGAGGGCTGTACAGGGAGATCCAAGAGAATTTCATGAGGGGAAGTCATATTTGGTTGATTGTATGTCGCAACAGTTGTTGAGGGATTATATGCGGCTAAATGCATCCCTAGGTATTTTGCCCAGTTCCCCGATGCTTGGTCGCAAAAATGGCTATGATCGGCATGTTAGTGATCAGACGGAGACACCGGGCATGTGA 2583 0.4375 MPSWWGKSPSKEVNRKANRESILDTIQRKLKNASEEKRNNKSGGSRRHHSGAIPEKGSKSIIPSRSPSPSMHGSKPSIYCPLPKPGYVSNRGDPTDAEGDIATASVSSDSSIDSGDSADSQLVSPLESDCENGNRATINSSFRVVHKDQLTVIQRNSRVSSKPAPQLCNNKLLYTSARGVPLHLQNLQIARPGGLCSAPNSLMSSPSRSPMRAFGPEQVLNSGFCTGKLYPDIASGHCSSPGSCHNSSHKSVGEDPSRQIFCPHNRCSPECSPIPSPRITSSGPSSRIQSGTVTPLHPQVGCAVAESPRRRPDDVKKQSHRLPLPPITVTKSRPFSPTYSASTTPTPRSPARAENLTSPSSRWKKGQLLGRGTFGHVYLGFNRESGEMCAMKEVTLFSDDAKSRECAQQLGQEIALLSRLRHPNIVQYYGSEEVDDKLYIYLEYVSGGSIYKLVQEYGQLGEIAIRNYTRQILSGLAYLHAKNTVHRDIKGANILVDPNGRIKLADFGMAKHISGESCPFSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAALFKIGNSKELPTIPAHLSEEGKDFVRLCLQRNPLNRPSAGQLLEHPFVKNAMLERHILTASPSEAPAAIINAVRSLAIGPAKPNLCLDSEVAGICPSRSLRAVSGSSDAHTPRNLSCPISPSRSLPLPSRSLHASGRMSPSPISSPHTASGSSTPLTSGGGAIPFHLTKQPILSYEDVGMIQKSQNGLYSSGNTAYLGSGRKTQTTHACRDIASSDNDILANHDKRAVQGDPREFHEGKSYLVDCMSQQLLRDYMRLNASLGILPSSPMLGRKNGYDRHVSDQTETPGM 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi190g00033 860 CDD STKc_MEKK1_plant 362 619 - -
Sebi190g00033 860 Coils Coil 16 36 - -
Sebi190g00033 860 SUPERFAMILY Protein kinase-like (PK-like) 361 700 IPR011009 -
Sebi190g00033 860 MobiDBLite consensus disorder prediction 1 131 - -
Sebi190g00033 860 Gene3D Transferase(Phosphotransferase) domain 1 360 641 - -
Sebi190g00033 860 MobiDBLite consensus disorder prediction 673 730 - -
Sebi190g00033 860 Pfam Protein kinase domain 364 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi190g00033 860 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 47 631 - -
Sebi190g00033 860 MobiDBLite consensus disorder prediction 331 359 - -
Sebi190g00033 860 MobiDBLite consensus disorder prediction 12 54 - -
Sebi190g00033 860 MobiDBLite consensus disorder prediction 274 296 - -
Sebi190g00033 860 MobiDBLite consensus disorder prediction 273 359 - -
Sebi190g00033 860 MobiDBLite consensus disorder prediction 101 131 - -
Sebi190g00033 860 MobiDBLite consensus disorder prediction 673 732 - -
Sebi190g00033 860 SMART serkin_6 363 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi190g00033 860 ProSiteProfiles Protein kinase domain profile. 363 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi190g00033 860 ProSitePatterns Protein kinases ATP-binding region signature. 369 392 IPR017441 GO:0005524
Sebi190g00033 860 FunFam Mitogen-activated protein kinase kinase kinase 361 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi190g00033 Sebi-Chr190 514893 519697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi190g00033 1 746 MAP Kinase Kinase Kinase AT1G63700 61.683 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sebi190g00033 Pkinase 5.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi190g00033 K20717 - gmx:100814422 1107.82