Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi190g00027 ATGGAAGACAATGAATGTCAACCACTTGAAATTGATAAGCCCAAGGATATTTTTCTTGGACAAATTGTTTATAGTATGGACAAAGCCTATAACTTATACCAAGAACATGCTTTCAAAATGGGCTTTAGTGTAAGAAAAGGGAGGCAATTGTATTACGATAATGAGAAGAAGATCACACGCTTGAAAGAATTTTATTGCTCCAAGGAAGGGTTTAAGAATAATGAAGCCGAAGGTGAAGTGGCTTATGGAAGAGCAGATTCAAGGACAAATTGCAAAGCCATGGTGAGATTTAATGTGAGCAAGGATGGAGTGTGGAAAATTACAAAATTAGAAATGAATCACAACCACAACTTTGTGCCATCTGAGCAAAGGCATTTGTTACGTTTTATGAGAAAAGTATCACAAGCCAAATGA 414 0.3623 MEDNECQPLEIDKPKDIFLGQIVYSMDKAYNLYQEHAFKMGFSVRKGRQLYYDNEKKITRLKEFYCSKEGFKNNEAEGEVAYGRADSRTNCKAMVRFNVSKDGVWKITKLEMNHNHNFVPSEQRHLLRFMRKVSQAK 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi190g00027 137 Pfam FAR1 DNA-binding domain 32 120 IPR004330 -
Sebi190g00027 137 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi190g00027 Sebi-Chr190 410572 410985 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi190g00027 FAR1 4.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi190g00027 - - tpra:123905334 232.261