Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi190g00025 ATGTCTTCTGATCTGTATGGTTTTGGCACTAGTTTGCACACACATTCAAGCTCAGAACTGGTCTCCTCTGAAGGAGGTGGAGACCTTCCATTTTTCTCTGACCCTTTCCCTTTCTTCACCAGCTCTCACACTCACACTGATGTAGCTCAACACAATTCCAACCCATTTGATGAAGCTCTTCCTTCTCTTGACCCATTTTCTTCCACTCCTTTTTTCTCCTTCTCTCCTCCAAGTTCCCACTTGGAAAGCCTCAGCCTTTATCATCATCAGGCTACTAATAACCGTGTGCAGCCTCTGTCAAATGGCACAAATCTAGCAAGTGAATTGGCAAGTTTCTCAGCTTTTGATGGGTCAGAAGTGAAAAGTGAGGGTGTTGATTACACCTACAATCAGCAATTCCTTCCTCATAGTTACAGTGGTGCTGAGAATGTATATAAGTACATGCAATTGCAAAGGAGCTTCAGCAGTAACTCTTTTGAAGGGAAGCCAGGTTTTCAGTTCCAACCTCAACATGATGCTCTGCTTGACGATTCCCCAAAATTTCAAAGCCATGACATGGACTCTCCTGAAAACAGTGGACAAATGAGGAGGAACATGAAAGCAAATCACATGTCTCCAACGGAAGGACCGTTGTTAGAGGAACCAAACTTCAAAGTAGGGCGTTATAGTGCTGAAGAAAGAAAAGAAAAAATTTCAAAATACAGAGCCAAGAGAACCCAGAGGAACTTCAACAAGACCATCAAGTATGCATGCCGAAAGACACTAGCCGACAATCGACCACGCATACGTGGCAGGTTTGCTCGCAACGACGAGGCCAGCGAGATTCTCAAGGCTCCGTGTTCTGCCAGAGATGAAGACGAAGTCGATTTCTGGATTGAAGAATTGCGGTTGCATGAGGAGCAAGACGATGTAACAGTACTGGGAGCAGAACAATATGTGAAAAGCTATGGAGCTAGTCAGTTTCAATACTGTGGCTTTTGA 981 0.4444 MSSDLYGFGTSLHTHSSSELVSSEGGGDLPFFSDPFPFFTSSHTHTDVAQHNSNPFDEALPSLDPFSSTPFFSFSPPSSHLESLSLYHHQATNNRVQPLSNGTNLASELASFSAFDGSEVKSEGVDYTYNQQFLPHSYSGAENVYKYMQLQRSFSSNSFEGKPGFQFQPQHDALLDDSPKFQSHDMDSPENSGQMRRNMKANHMSPTEGPLLEEPNFKVGRYSAEERKEKISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEASEILKAPCSARDEDEVDFWIEELRLHEEQDDVTVLGAEQYVKSYGASQFQYCGF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi190g00025 326 MobiDBLite consensus disorder prediction 170 195 - -
Sebi190g00025 326 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 45 290 IPR045281 GO:0009909
Sebi190g00025 326 ProSiteProfiles CCT domain profile. 227 269 IPR010402 GO:0005515
Sebi190g00025 326 Pfam CCT motif 227 269 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi190g00025 Sebi-Chr190 388960 390548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi190g00025 223 274 C2C2-CO-like Transcription Factor Family AT5G24930 48.077 2.96e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi190g00025 CCT 5.9e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi190g00025 - - gmx:102665661 358.221