Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi190g00020 ATGGCTTCATCATCAACTGGATTCTGCTACTCTGATGTCTCATCTGGTAACCAAACACATCTTGTGAACAATATCCAACAAAGCTATGTGTCCGATCCAGAGATGTTCAACCTCACCACAGGCATGGAGATGATAGGCTTCTCCAAGCATCTTCAACAACAGAGTACTGACACCAACGCTGTCATGGCCAAAAGTTTCTTCAGCAAACCAGGTCAACACTTAAGTCCTTCCTCTTCAAAAACCATGAATGAGTCTTCTACCAATTTCTATCGTCACCATGAGATTTCCGAAACAAGTGGTGAGAATCTAATAGTCGGTGCTGCCCATGATTCTGTTTCTGCCCCGTGGCAGGAGAACAGGTTGCTAGTGGATGATTCTTCTTTGAGGTGTGTGTTTCCTTGTGAAGGTAATGAAAGACCAAGTCAAGGCCTTTCACTCTCTCTCAGTTCAACAAACCCTTCAAGTATTGGGTTACAGTCTTTTGAACTAAGACACACTACTGACCATCATGTTCATCAACATCAAAATGTTTATCAAGGACATTTCGTGCTCAAGAACTCCAAGTTCTTGGTTCCTGCACAGGATCTGCTAAACGAGTTTTGCAGTCTAGGGACAAAGCAAAATGATGTACCAAAGCAAAAGTCTCAGAAAAACAAACAGTGGGAAGAGGACAATTCGTCAAGGAAGCATTGTCTTAGCTCTCTAGAGTTTGTAGAATTGCAGAAGAAAAAGACAAAGCTGCTTTCAATGCTGGAAGAGGTTGAGAGAAGATACAGGCACTACTGCAATCAGATGAAGACTGTGGTGTCCTCCTTTGAAGCAGTGGCTGGTAATGGTGCTGCCACAGTGTACTCATGTTTAGCTCTGAAAGCCATGTCAAAACATTTCAGGTGTTTGAAAGATGGGATTTTGGATCAGATTCAGGCGACTAGGAAAGCCATGGGAGAGAAAGACCCAATTGCACCAGGAACAACCAGGGGAGAAACACCGAGGCTTAGAGTCATTGACCAGGCACTGAGACAACAGAGGGCATTCCAGCAACTCAACATGATGGAAACCCATCCATGGAGACCTCAACGCGGCCTTCCCGAACGATCCGTTTCCGTTCTTCGAGCTTGGCTTTTTGAGCACTTTCTCCATCCGGTGAGGCTATGGAAGCCAATGGTGGAACAAATGTACTTGGAAGAAGAGAAGGAAGAAAACAACAACATTTCATCCTCCGATAATGGAGGCAACAATATTCATGAAGATGATGACATATCTCCTTCAATGAGATCTGAGGATCAGAAGCCAACACAATCTCGACTCCTTCGTATTGACTCAGAGTGTGTGTCGTCGATAGTCAATGCTAACAACTCAGATCATAAAAACGACCCAAAGAACATCAAAACGATGCACATGAATCAGCAGGAAGACACATTTGGATCTGTTGATATTGATTTTTCATGTTATCCGCAGCAGTCTTCTTCCGGCATGGTTTCTTTTGCAAGTAATGATCAAAACGCCAATAATCAGAGTTTCCACAGTGGCGGCGGAGTGTCATTGACGCTAGGGTTACAGCAACACGGTGGAAGCGGTGTGAGCATAGCGTTTCCCTCAGCAACAGAGTTTTACACAAGCAGGGATCAGCACATGGAAGGGTGTCAACCAATTCATCACTACTCTCTTTTGGATGGAGAAGGACAGAATATGCCGTACCGGAATCTGATGGGGACGCAGTTGCTTCATGACTTGGCTTGA 1740 0.4454 MASSSTGFCYSDVSSGNQTHLVNNIQQSYVSDPEMFNLTTGMEMIGFSKHLQQQSTDTNAVMAKSFFSKPGQHLSPSSSKTMNESSTNFYRHHEISETSGENLIVGAAHDSVSAPWQENRLLVDDSSLRCVFPCEGNERPSQGLSLSLSSTNPSSIGLQSFELRHTTDHHVHQHQNVYQGHFVLKNSKFLVPAQDLLNEFCSLGTKQNDVPKQKSQKNKQWEEDNSSRKHCLSSLEFVELQKKKTKLLSMLEEVERRYRHYCNQMKTVVSSFEAVAGNGAATVYSCLALKAMSKHFRCLKDGILDQIQATRKAMGEKDPIAPGTTRGETPRLRVIDQALRQQRAFQQLNMMETHPWRPQRGLPERSVSVLRAWLFEHFLHPVRLWKPMVEQMYLEEEKEENNNISSSDNGGNNIHEDDDISPSMRSEDQKPTQSRLLRIDSECVSSIVNANNSDHKNDPKNIKTMHMNQQEDTFGSVDIDFSCYPQQSSSGMVSFASNDQNANNQSFHSGGGVSLTLGLQQHGGSGVSIAFPSATEFYTSRDQHMEGCQPIHHYSLLDGEGQNMPYRNLMGTQLLHDLA 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi190g00020 579 Gene3D - 362 488 - -
Sebi190g00020 579 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 87 381 - -
Sebi190g00020 579 MobiDBLite consensus disorder prediction 412 435 - -
Sebi190g00020 579 Pfam Associated with HOX 183 303 IPR006563 -
Sebi190g00020 579 MobiDBLite consensus disorder prediction 396 436 - -
Sebi190g00020 579 SMART prehox3 178 305 IPR006563 -
Sebi190g00020 579 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi190g00020 Sebi-Chr190 285055 302911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi190g00020 88 579 Homeobox Transcription Factor Family AT5G41410 39.698 4.32e-103 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi190g00020 - - gmx:100792789 702.205