Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi190g00006 ATGGATGAGCTTGCGTGCTTGATGGATTGGGATTTGGAAGCTATTGTGAGAGGATGCAACGGTGAAGCACCAGCTGCCACCATCATGGACGACCCACATCTCAATTTTTCTCATTTCTTCTCTGAACAAGATGAGCTACTTGGCAGTTTTCCTCAATTCTCAGAAACCACTAATGTCTTTGATGAATTGGAAGAGCTCTACAAACCTTTCTACCCAGTTTTGCACCCTCTTTCATCACAGAGCATAGTCACAAGTTCCTTACCTATCCCCAAAGAACCTGAAGAAGCCAAAGTACTAAAAGCATCAGAGAAAGTAGCTTCACAAGATTTGCAAAAAGCATCAGACAAAGTAGCTTCACAAGATTTGCAAGTTCCCACAGTATCTAAATATAAAAGAAGCAAGAAGAACCAGAACAAGAGTGTGGTCATGAAACAGGTGACAGCAGGGGATGGTGTGTGTGATGCATGGGCATGGCGTAAATATGGACAGAAACCAATAAAGGGGAGCACCAGGAATAAGAACAATTCCATGGTTACACCTCCAATTCCAAGCAGTGGTGACCAACAACACACCTGTTCTTCAAATTCCTCATCAACAGAAATTGATCACTCTCCAAGGACACCTTTGGTGGTGGTGGCCTCATCCAACATTGAAGATGAGCTTGTGACAAGTGTGCAACAAAGTAATAAAGGCTTGGAGAAAGGGGAAGATTTTCTTGAGTGGTTGGATGATGCTGAAGGTGGTGATGGTTGGATTCCAAGCATAGAGTTAGAAGAACTCATAGGACTTAAGTTCCAACAATTTGTTGATGGCTGCGGTTTCACGGATGGTTTTGCTGACACTTAG 846 0.4314 MDELACLMDWDLEAIVRGCNGEAPAATIMDDPHLNFSHFFSEQDELLGSFPQFSETTNVFDELEELYKPFYPVLHPLSSQSIVTSSLPIPKEPEEAKVLKASEKVASQDLQKASDKVASQDLQVPTVSKYKRSKKNQNKSVVMKQVTAGDGVCDAWAWRKYGQKPIKGSTRNKNNSMVTPPIPSSGDQQHTCSSNSSSTEIDHSPRTPLVVVASSNIEDELVTSVQQSNKGLEKGEDFLEWLDDAEGGDGWIPSIELEELIGLKFQQFVDGCGFTDGFADT 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi190g00006 281 Gene3D WRKY domain 128 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi190g00006 281 ProSiteProfiles WRKY domain profile. 147 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi190g00006 281 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 8 169 IPR044810 GO:0003700
Sebi190g00006 281 SUPERFAMILY WRKY DNA-binding domain 152 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi190g00006 281 MobiDBLite consensus disorder prediction 165 206 - -
Sebi190g00006 281 MobiDBLite consensus disorder prediction 167 204 - -
Sebi190g00006 281 SMART WRKY_cls 152 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi190g00006 Sebi-Chr190 87341 88577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi190g00006 1 208 WRKY Transcription Factor Family AT4G23550 38.389 1.10e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi190g00006 K13426 K13425 gmx:102663255 252.292