Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi18g00063 ATGAACGTTTTCTCAACCGCTTCAACTTCTTCTTCAACCGCTTCCGATGAAGACTTAGAAGGGAGACATAGGAAGAAGAGGAAGTTTTGGAAGGATTACTTTAGGAGGCTCACTAGGCAGGTTTTGTATAAACAAGAGGAAATGCAAATGAAGTTCTTGGAAGCTATTGAGAAACGAGAGAGGGAATGGGTGGCACAACAAGATTGTTGGAGGATGCAAGAAATGGCGAGGATTAATAAGGAACATGAGATACTCATTCAAGAACGATCAACAGCTGCGGCTAAAGATGTTGCTGTTATTGCGATGTTGCAAAAGTTGTGTGGCAATGAGAATCCTACACAACCTGAAGGTGGCAATTCCCTTCCCCAACAACCACCACAACCTACAGTATCACAAAGAATGAACATTAATGGTGGCAGTGCTACAAGTCCAATAGTAAGCTCTTCTTCTTCTAGGTGGCCTAAGGCAGAAGTTCATGCTCTGATAAGGCTGAGGACAAGTCTTGAACCCAACTTTCATGAAAATGGACCAAAAGCTCCACTATGGGAGGAGCTATCAGCTGGAATGCAGAGGCTTGGCTACAACCGAAATGCAAAGAGATGCAAAGAGAAATGGGAGAACATCAATAAGTACTTCAAGAAAATGAGGGAAAGTAACAAACAAGACGTGAGGATAGTAAGACTTGTCCTTATTATCATGAGCTTGAAGCTCTATACAAAGAAAAAGGCAAAATCCAGAACCCCTTTGGCATTGCATTGCATACTTTGA 768 0.4219 MNVFSTASTSSSTASDEDLEGRHRKKRKFWKDYFRRLTRQVLYKQEEMQMKFLEAIEKREREWVAQQDCWRMQEMARINKEHEILIQERSTAAAKDVAVIAMLQKLCGNENPTQPEGGNSLPQQPPQPTVSQRMNINGGSATSPIVSSSSSRWPKAEVHALIRLRTSLEPNFHENGPKAPLWEELSAGMQRLGYNRNAKRCKEKWENINKYFKKMRESNKQDVRIVRLVLIIMSLKLYTKKKAKSRTPLALHCIL 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi18g00063 255 MobiDBLite consensus disorder prediction 1 21 - -
Sebi18g00063 255 MobiDBLite consensus disorder prediction 109 130 - -
Sebi18g00063 255 MobiDBLite consensus disorder prediction 1 15 - -
Sebi18g00063 255 Pfam Myb/SANT-like DNA-binding domain 151 222 IPR044822 -
Sebi18g00063 255 Gene3D - 153 214 - -
Sebi18g00063 255 PANTHER FI21293P1 9 223 - -
Sebi18g00063 255 CDD GT1 152 216 - -
Sebi18g00063 255 FunFam Trihelix transcription factor GT-2 153 214 - -
Sebi18g00063 255 ProSiteProfiles Myb-like domain profile. 151 209 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi18g00063 Sebi-Chr18 2749862 2751338 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi18g00063 24 255 Trihelix Transcription Factor Family AT1G76890 47.368 5.30e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sebi18g00063 Myb_DNA-bind_4 3.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi18g00063 - - pcin:129303652 308.916