Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi18g00055 ATGAAGAGTTTGCTAGGCTGTATGGCAATCTTGGAAAAACATAAACCTTATGTTGCAATGCTCTTCATTCAGTTTGTATATGCAGGAATGGCTCTGTTATCTAAGGCAGCAATTTCAAAGGGAATGAGCCCTTATGTGTTTGTTGTTTATAGACAAACCTTTGCATCACTTGCCTTATCTCCATTTGCTCTCTTTGACAGTAAGCATGCTGCTCCTTTGTCATGCAACTTGTTGTGCAAGTTGTTTCTAATTTCCCTTGTTGGGCTAACAGCAAGTTCAAACCTTTACTATGTTTCAATCAACTATACCTCTGCAACCTTTGCTGCAGCAAGCACAAACACTGTCCCTTCTATTACTTTCATCATGGCAGCTTTAATTGGGATGGAAAGCATTTCAATAAAACATATGCATGGTGTGGCTAAGATTTTAGGTTCTGTTCTGAGCCTTTCAGGGGCAATAGTATTTGCTCTAGTCAAAGGACCTCCTTTACATTTTATGAATTGGTATCCAGAAAATCAGAACCAAAATTCTCATTCATTAACAACAGTTCACTCCAAAGGGGATTGTATTAAAGGCTCTCTTATGATGCTCTCAGCTAACACTGCTTGGTCCTTGTGGCTTATTTTACAGGGATTTGCTGTGAAGCAATACCCAGCAAAATTTCGCCTCACTATTCTACAATGTTTTTTTAGCTTCATACAGTCAGCTATTTTGGCTGTTGTAGTGGAGAGGAATCCTTCTGCATGGAGGCTTGGATGGGATTTTCATCTTCTTTCAGTGGCTTATTGTGGTGTAATTGTAACAGCCATTTGTTATTGGTTGCAAGTTTGCACGATAGAGACGAAAGGTCCAGTTTTCACAGCAATGTTCACCCCTCTAGCTCTCGTAATCACAGCAATATTCTCAGCACTATGTTGGAAAGAAACACTTCACTGGGGAAGTATTGGTGGAACTATTTTGTTAGTAGTTGGACTCTACAGTGTATTGTGGGGGAAGAAGAAGGAAGGTGTAAAAGTGGAAAACCGTGAAGCTGAACAAGCAAAAGCGGAAACCAGATTGGAGTGCATTATACAGCACTGA 1080 0.4009 MKSLLGCMAILEKHKPYVAMLFIQFVYAGMALLSKAAISKGMSPYVFVVYRQTFASLALSPFALFDSKHAAPLSCNLLCKLFLISLVGLTASSNLYYVSINYTSATFAAASTNTVPSITFIMAALIGMESISIKHMHGVAKILGSVLSLSGAIVFALVKGPPLHFMNWYPENQNQNSHSLTTVHSKGDCIKGSLMMLSANTAWSLWLILQGFAVKQYPAKFRLTILQCFFSFIQSAILAVVVERNPSAWRLGWDFHLLSVAYCGVIVTAICYWLQVCTIETKGPVFTAMFTPLALVITAIFSALCWKETLHWGSIGGTILLVVGLYSVLWGKKKEGVKVENREAEQAKAETRLECIIQH 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi18g00055 359 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Sebi18g00055 359 Pfam EamA-like transporter family 15 149 IPR000620 GO:0016020
Sebi18g00055 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 149 - -
Sebi18g00055 359 Coils Coil 334 354 - -
Sebi18g00055 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 334 - -
Sebi18g00055 359 PANTHER WAT1-RELATED PROTEIN 15 340 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi18g00055 Sebi-Chr18 2315136 2318901 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi18g00055 1 336 Nodulin-like Gene Family AT5G07050 38.192 3.32e-81 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi18g00055 - - lja:Lj0g3v0009669.1 603.208