Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi18g00014 ATGAGTCGAGGAGGTGCAGCTGGTCCCAAAGGGAAGAAGAAGGGAGTGACATTCACCATTGACTGCGCGAAGCCAGTGGAGGACAAGATCATGGACATTGCATCTCTCGAGAAGTTCCTTCAAGAGAGGATTAAGGTTGGTGGCAAGGCCGGTGCTCTCGGCGATACCGTCACTGTTTCACGCGAGAAGACCAAGATCACTGTCACTTCTGACAGCAACTTCTCCAAACGGTATCTGAAGTACATGACAAAGAAGTACTTGAAGAAACACAATGTACGGGACTGGCTCAGAGTTATTGCTTCTAACAAAGATAGAAATGTTTATGAATTGAGGTACTTCAACATTGCTGAGAATGAAGGAGAGGAAGAAGATTAA 375 0.4587 MSRGGAAGPKGKKKGVTFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVSREKTKITVTSDSNFSKRYLKYMTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi18g00014 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
Sebi18g00014 124 Gene3D - 6 124 IPR038526 -
Sebi18g00014 124 PANTHER 60S RIBOSOMAL PROTEIN L22 3 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Sebi18g00014 124 FunFam 60S ribosomal protein L22-2 5 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi18g00014 Sebi-Chr18 615974 617698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi18g00014 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.097 3.16e-69 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi18g00014 K02891 - nnu:104598935 224.557