Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi189g00052 ATGAGTGATGAGTATATAAGATCTGCTCTTGATTATGTAGCAAATCCGAAGGATATGAATTTGTTTAGGGACACTTTTTATAACTCTGCAGGGAAAGAGGGGAAATTCAGGGGAGACCCAAATTTATATGTGGTTGGTTGGGCTAATTTTGCATTTTATGCCACTGATTTTGGGTGGGGAAAACCTGTTTGTTTGGTTCCTGGGGGCATTAATTCTAATGGTAAGGCTTTCATTCTTAATACAGGAAGTGGTGATGGGTTTATTGTGGCCATTTGTTTGCAACCTTCACATGTTGATGCTTTGAAGAAGTTGTTTTATGAGGATATGGAGACTACTACTTCCTAG 345 0.3884 MSDEYIRSALDYVANPKDMNLFRDTFYNSAGKEGKFRGDPNLYVVGWANFAFYATDFGWGKPVCLVPGGINSNGKAFILNTGSGDGFIVAICLQPSHVDALKKLFYEDMETTTS 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi189g00052 114 Pfam Transferase family 2 107 - -
Sebi189g00052 114 Gene3D - 1 108 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi189g00052 Sebi-Chr189 1540121 1540465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi189g00052 1 107 Monolignol Biosynthesis Gene Families AT5G48930 36.697 6.20e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi189g00052 K13065 - gmx:100819383 182.57