Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi189g00046 ATGGCTTCTGGGTCATCTTCATCCACTTCTTTCTTTAGATGGTTTTTTATGGAGTATGTTCCTGGAAAGAACATTGCTATGCTTCCTCGATTATTTTGTATGGATCATTTGAATCATGTTAGCAAAAATGTTTTATTTCGAGACCCTGTTAACAATATTTTCCATATTGCTGTTCTCAAGACTGATGATGATCTTTATTTTACTTATGGGTGGTCGCTTTTAAGGGATGTGTTCCATTTGGAAAATGGTGCATGGATGAAATTTTACTTCTTCGATGAGAGTGAATTTTTTGTAAGGGTTTTTGATAGGAATATGGTTGAGTTCAACTATCCGGTGCCTTCAAATGTATATCACCATGGGGTAGGTGTTTCCCCTGACTTAACTGTTCCTTCTGCTTCCTGGTCTCGGGATTTCCATCATGCTTCAATTGACAAGGTTCTTTCTGAAAAGCAAGTGTCTTCAAACAGGATGACTATGCCTGTTGTGTTATGTAAATGCCTTCCCTTGAATGCATCAAATATTGTTCTAAGAGACGAAAATAGAACTGAATTTCAATGCCGTTTCAGGAGGGCTCCCAGAAGACGCAATGAGGGTTATATCACAAATGGGTGGCAAGAGTTTTGTAGTGCTAGAGGATTAAGTGGTGGTTGTGTAGTTCGTTTTAGTGTTAGTTCAGAGTCTATTAGGTTTGTTCAAGTCCAATACAAGTGGATTATTGTGGAGTTTGATAATACATCTGATGTTGCTGCTCTTCCATGGATGTTTTCACGAGTTTTTTACCATCACATTCCTTCAGAAGTTAATCTTTTTGATCGACATGGAAATGAATTTGTCGTTGAGGACCACACAGGGGCTTCATACATGTTTGCTCGTGATTTTTGTGAAGAAGTTGAAGATGTTGTTTATTTCAAAGATATAGATGGGAGAAGGATTACAATAACTGTCCAAAAAGATGAAGATCGTATTTATTTTGCAGTTGGATGGAAGGATATTGGAAATTTGTACAATCTGAAAGATGGTGGTTGGCTCAAAGTTGAATATCAGGCCTTTTCAACTAACAGTTTTCTTTTTGAAGTTTTGGACATGCCAAAAAGGTGA 1098 0.3734 MASGSSSSTSFFRWFFMEYVPGKNIAMLPRLFCMDHLNHVSKNVLFRDPVNNIFHIAVLKTDDDLYFTYGWSLLRDVFHLENGAWMKFYFFDESEFFVRVFDRNMVEFNYPVPSNVYHHGVGVSPDLTVPSASWSRDFHHASIDKVLSEKQVSSNRMTMPVVLCKCLPLNASNIVLRDENRTEFQCRFRRAPRRRNEGYITNGWQEFCSARGLSGGCVVRFSVSSESIRFVQVQYKWIIVEFDNTSDVAALPWMFSRVFYHHIPSEVNLFDRHGNEFVVEDHTGASYMFARDFCEEVEDVVYFKDIDGRRITITVQKDEDRIYFAVGWKDIGNLYNLKDGGWLKVEYQAFSTNSFLFEVLDMPKR 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi189g00046 365 Gene3D - 3 106 IPR015300 -
Sebi189g00046 365 Gene3D - 280 362 IPR015300 -
Sebi189g00046 365 PANTHER B3 DOMAIN-CONTAINING 7 224 - -
Sebi189g00046 365 ProSiteProfiles B3 DNA-binding domain profile. 142 237 IPR003340 GO:0003677
Sebi189g00046 365 SUPERFAMILY DNA-binding pseudobarrel domain 6 104 IPR015300 -
Sebi189g00046 365 SUPERFAMILY DNA-binding pseudobarrel domain 142 234 IPR015300 -
Sebi189g00046 365 Pfam B3 DNA binding domain 146 226 IPR003340 GO:0003677
Sebi189g00046 365 SUPERFAMILY DNA-binding pseudobarrel domain 288 348 IPR015300 -
Sebi189g00046 365 Gene3D - 132 236 IPR015300 -
Sebi189g00046 365 SMART B3_2 143 237 IPR003340 GO:0003677
Sebi189g00046 365 SMART B3_2 15 104 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi189g00046 Sebi-Chr189 1323674 1326238 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi189g00046 B3 1.1e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi189g00046 - K01019 egu:105053919 46.9802