Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi189g00043 GGGGACCGGATTCAATGCACTGTCAAGAGCTTTCATGTCTATCTGTTTGAAAGAAATATTCTGGAGGGCAATGTTTACATGATTTCAAATCTCTCAGTTGCTTTGAATGCTGCAAAGTTTAAACCAACTTTTCATGAATTTAGAATGTTCTTTAAAAGAGAAACTGAGGTTCGTTTGATTGAAGATTCTACTATACCAAACAATGTCTTCTCTTTCTTTCCATTCAAGGATATATTGAATGAGGAATTGGAAGATCGTCATTTAGTTGATGTAATCGGTCTCCTTTCTGATAAGGGTGACTTGATCGAGTTTAAAAGGAATGGCAAGATCTGTAACTATGTTGTTTTAGAGCTGGATGATCTTGAGGGTGGAAATAAGCTTCGATGCACTTTATGGGAAGATTTTGCTCATGATTTTCTTAGGCAGCTCGATGAGGATAAGTCAAATGTATCTGTTATTGTTTTGCAATTTGCAAAGATGAAGTTCTTCAAAGGTTCAATGGGGGTGTCCAATAATACTTACAATACTAAGATGTTTGTGAATCCAAATTTTCCTGAAGTTGCTGCTTTCAAGACTAATCAGTCGTTGACTCAATTGGCTGGTCCTGTGGTTCTATCTGCTGAAGAGGAATTTCTCCAGATTTTAGAATTCAAATCAATTGTTGATCTGAAGGAAATGGAGCAGCATTGTGATGTTCATTATTCTTCTTTTGACACAAGGTATTCAATCCAAGTGAGGATTGTTGATGAGACTGATTCTGCTTCGTTCATGATTTTGACAAAGAGGCTTCCAATTTTCTGGATCTTTCTGCAGCTGAATTTCGGTGGGGACAAAAACAATCATCCAGAAGAGATTGATGCTTTCAAAGAAAAGAAAATTTTGCTCAAAGTGAACATTAAGATGCAAAATCAGTTTTCAGTTCTTCCAAATATCATTAAGGTCGTCAGATTGTGCTATGATGAGAATTTGATAAATGCTTTTATCCAAAAGTATAAGACTGAGGAAGTTGGTTTCATGGTGGACAATTCGGAAGTTATGACTCAATTCATTGAATCAAGTGATGTTATTAAGTTTAAGACTCTTGAGTCTAAAATTGCAGAAAACACAATTACATCAATCTCCATTTTGGAAGAAATTCAATCAATGAAAGCTTTTGATAATGATTCTTCTTTTAAAAAGGTTCTTCCATTACCGGATGATGATGAGATGTCTATAAATAAAATTGGTTTCATGGTGGAGAATTCAGAACTTATGACTCAATTCACTGAATCAAATGATGTTATTAAGGACAACAACACACCAGGCATGGATAAGTGTTCTAAGTCATCATCCATTGTGGAAGAAATTCAGTCAATGAAAGCTTCTGAGAATGATTCTTCTTTGAAAAAGGTCCTTCCATTGCCAGATGATGCTGAGATGTCTGCAAAGAAAATGAGGAAGATCATTAAACAAGAGAAGCCTTGA 1464 0.3531 GDRIQCTVKSFHVYLFERNILEGNVYMISNLSVALNAAKFKPTFHEFRMFFKRETEVRLIEDSTIPNNVFSFFPFKDILNEELEDRHLVDVIGLLSDKGDLIEFKRNGKICNYVVLELDDLEGGNKLRCTLWEDFAHDFLRQLDEDKSNVSVIVLQFAKMKFFKGSMGVSNNTYNTKMFVNPNFPEVAAFKTNQSLTQLAGPVVLSAEEEFLQILEFKSIVDLKEMEQHCDVHYSSFDTRYSIQVRIVDETDSASFMILTKRLPIFWIFLQLNFGGDKNNHPEEIDAFKEKKILLKVNIKMQNQFSVLPNIIKVVRLCYDENLINAFIQKYKTEEVGFMVDNSEVMTQFIESSDVIKFKTLESKIAENTITSISILEEIQSMKAFDNDSSFKKVLPLPDDDEMSINKIGFMVENSELMTQFTESNDVIKDNNTPGMDKCSKSSSIVEEIQSMKASENDSSLKKVLPLPDDAEMSAKKMRKIIKQEKP 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi189g00043 487 Pfam Domain of unknown function DUF223 1 84 IPR003871 -
Sebi189g00043 487 Gene3D - 64 198 IPR012340 -
Sebi189g00043 487 SUPERFAMILY Nucleic acid-binding proteins 70 192 IPR012340 -
Sebi189g00043 487 Gene3D - 1 63 IPR012340 -
Sebi189g00043 487 CDD RPA1_DBD_B_like 90 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi189g00043 Sebi-Chr189 1317690 1320393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi189g00043 23 192 Core DNA Replication Machinery Family AT2G06510 32.386 2.08e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi189g00043 - - adu:107477146 281.952