Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi189g00041 ATGTGCTGTTTTTGTTGCAAGGTTTTATTGAAGGAGTGTATTTTGGCAGCTTACATGTCATCTCCCTGCCACATAGAGTTGATATTATCTGAAAAGGAAGAACCAGTCAAGAAGGAGCACGAGACTCAATTGGCAACCAGCAAGAAGAAGTCCCAAGCTATTAGAAGTGGTGCTTCATCTTAA 183 0.4098 MCCFCCKVLLKECILAAYMSSPCHIELILSEKEEPVKKEHETQLATSKKKSQAIRSGASS 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi189g00041 60 PANTHER 60S RIBOSOMAL PROTEIN L17 16 52 IPR005721 GO:0003735|GO:0006412|GO:0015934
Sebi189g00041 60 Gene3D Ribosomal protein L22/L17 15 59 IPR036394 GO:0003735|GO:0005840|GO:0006412
Sebi189g00041 60 MobiDBLite consensus disorder prediction 39 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi189g00041 Sebi-Chr189 1143527 1143793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi189g00041 18 60 Cytoplasmic Ribosomal Protein Gene Family AT1G27400 74.419 8.58e-14 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi189g00041 K02880 - jre:109003161 77.7962