Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi189g00004 ATGGCTCCTTCTTCTGTCACTGTTACTGCCCGCTTTCATGAATCCGTCACCAGAAATGCACTTCGCTCCTATCTTGCTGAGTTTATCTCTACTTTCTTCTATGTCATTGTCGTCGTTGGCTCTGGAATGTCCTCAAGGAAGTTGATGCCTGATGCTTCAGTGAACCCAACAAGTTTGCTTGTGGCTGCCATTGCAAATGCTTTTGCATTGTCCTCTGTTCTGTATATAGCATGGGACATCTCTGGTGGACATGTCAATCCGGCTGTGACCTTTGCAATGGCAGTGGGAGGTCACATTAGTGTTCCAACTGCTCTCTTTTATTGGGTTGCTCAATTGATTGCCTCTGTTATGGCTTGCCTTGTTCTCAGGGTCATTGTTGTTGGAATGCATGTGCCAACATACACAATTGCAGAAGAGATGACAGGGTTTGGAGCATCAGTGTTAGAGGGTATATTGACATTTGTTTTGGTGTATAGTGTTATGCAGCAAGGGGACCCAAGGCGTGGTGCATTGAGTGCCACAGGGACACTTGTGGTTGGCTTAATAGCTGGGGCTAATGTGTTGGCTTCAGGACCATTCTCTGGAGGGTCAATGAACCCTGCTTTGCTTTTGGCTCAGCAGCAATTGCAGGCACTTTCAGGAACCAAGCAGTGTATTGGGTTGGACCCTTGA 672 0.4702 MAPSSVTVTARFHESVTRNALRSYLAEFISTFFYVIVVVGSGMSSRKLMPDASVNPTSLLVAAIANAFALSSVLYIAWDISGGHVNPAVTFAMAVGGHISVPTALFYWVAQLIASVMACLVLRVIVVGMHVPTYTIAEEMTGFGASVLEGILTFVLVYSVMQQGDPRRGALSATGTLVVGLIAGANVLASGPFSGGSMNPALLLAQQQLQALSGTKQCIGLDP 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi189g00004 223 PRINTS Major intrinsic protein family signature 22 41 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi189g00004 223 PRINTS Major intrinsic protein family signature 66 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi189g00004 223 PRINTS Major intrinsic protein family signature 148 166 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi189g00004 223 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi189g00004 223 PRINTS Major intrinsic protein family signature 103 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi189g00004 223 Pfam Major intrinsic protein 17 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi189g00004 223 ProSitePatterns MIP family signature. 84 92 IPR022357 -
Sebi189g00004 223 Gene3D Glycerol uptake facilitator protein. 5 211 IPR023271 -
Sebi189g00004 223 PANTHER AQUAPORIN-8 12 206 IPR034294 -
Sebi189g00004 223 SUPERFAMILY Aquaporin-like 12 205 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi189g00004 Sebi-Chr189 53714 55471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi189g00004 1 201 Major Intrinsic Protein MIP AT3G47440 64.677 9.76e-88 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi189g00004 K09873 - gmx:100801448 351.673