Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi188g00095 ATGAGGCCAATTTTGATGAAAGGGCACGAGAGGCCATTAACATTCCTCAAGTACAACAGAGACGGCGATCTCCTTTTCTCTTGCGCCAAGGACCACAACCCCACCGTGTGGTTCGCCGACAACGGCGAACGAGATTCGGGACTACTCATAACTGGTAGTGCTGATCAAACTGCCAAGCTATGGAACGTTCAAACTGGTCAGCAATTGTTCACCTTCAATTTTGATTCCCCTGCTAGGTCTGTCGACTTCGCTGTCGGTGATAATCTTGCAGTTATCACTACTGACCCCTTTATGGAACTGTCTTCTGCAATTCACGTTAAACGCATTGCTAAAGATCTCACTCAACAGACAGGGGAATCTCTGCTTGTCATTAAGGGCCCTCAGGGAAGAATTAATAGAGCTATTTGGGGACCCCTCAACAAAACCATTATTAGTGCAGGGGAAGATGCTGTTATTCGAATTTGGGATTCTGAGACAGGAAAACTACTTAAAGAGTCGGACAAGGAATCTGGCCACAAAAAGACAATAACATCACTTGCAAAATCTGCTGATGGTTCACATTTTCTTACTGGCTCCCTTGATAAGTCTGCTAGGATTTGGGATACCAGAACATTGACTCTTATCAAGACATATGTGACAGAACGCCCCGTCAATGCAGTAACAATGTCACCTCTTCTTGATCACGTGGTAATTGGAGGTGGTCAGGATGCATCAGCTGTTACAACTACGGATCATCGTGCTGGCAAATTTGAAGCCAAATTCTTTGATAAGATTCTTCAAGAAGAAATTGGGGGTGTGAAAGGGCATTTTGGACCGATTAATGCACTGGCCTTTAACCCTGATGGAAAAAGTTTTTCAAGTGGAGGTGAAGATGGGTATGTACGATTGCACCACTTCGACCCAGATTATTTCAATATCAAAATATAG 927 0.4401 MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERDSGLLITGSADQTAKLWNVQTGQQLFTFNFDSPARSVDFAVGDNLAVITTDPFMELSSAIHVKRIAKDLTQQTGESLLVIKGPQGRINRAIWGPLNKTIISAGEDAVIRIWDSETGKLLKESDKESGHKKTITSLAKSADGSHFLTGSLDKSARIWDTRTLTLIKTYVTERPVNAVTMSPLLDHVVIGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFNIKI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi188g00095 308 ProSiteProfiles Trp-Asp (WD) repeats profile. 266 296 IPR001680 GO:0005515
Sebi188g00095 308 Pfam WD domain, G-beta repeat 170 201 IPR001680 GO:0005515
Sebi188g00095 308 Pfam WD domain, G-beta repeat 265 296 IPR001680 GO:0005515
Sebi188g00095 308 Gene3D - 1 308 IPR015943 GO:0005515
Sebi188g00095 308 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 266 296 - -
Sebi188g00095 308 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 169 204 - -
Sebi188g00095 308 ProSiteProfiles Trp-Asp (WD) repeats profile. 169 210 IPR001680 GO:0005515
Sebi188g00095 308 ProSiteProfiles Trp-Asp (WD) repeats profile. 45 71 IPR001680 GO:0005515
Sebi188g00095 308 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 124 161 - -
Sebi188g00095 308 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 1 44 - -
Sebi188g00095 308 Hamap Eukaryotic translation initiation factor 3 subunit I [EIF3I]. 1 308 IPR027525 GO:0003743|GO:0005737|GO:0005852
Sebi188g00095 308 ProSiteProfiles Trp-Asp (WD) repeats profile. 124 165 IPR001680 GO:0005515
Sebi188g00095 308 SUPERFAMILY WD40 repeat-like 4 296 IPR036322 GO:0005515
Sebi188g00095 308 CDD WD40 7 296 - -
Sebi188g00095 308 ProSitePatterns Trp-Asp (WD) repeats signature. 143 157 IPR019775 -
Sebi188g00095 308 SMART WD40_4 204 243 IPR001680 GO:0005515
Sebi188g00095 308 SMART WD40_4 259 298 IPR001680 GO:0005515
Sebi188g00095 308 SMART WD40_4 117 156 IPR001680 GO:0005515
Sebi188g00095 308 SMART WD40_4 159 201 IPR001680 GO:0005515
Sebi188g00095 308 SMART WD40_4 21 62 IPR001680 GO:0005515
Sebi188g00095 308 PRINTS G protein beta WD-40 repeat signature 143 157 IPR020472 -
Sebi188g00095 308 PRINTS G protein beta WD-40 repeat signature 49 63 IPR020472 -
Sebi188g00095 308 PRINTS G protein beta WD-40 repeat signature 188 202 IPR020472 -
Sebi188g00095 308 ProSiteProfiles Trp-Asp (WD) repeats profile. 6 37 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi188g00095 Sebi-Chr188 1476241 1478329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi188g00095 1 308 Eukaryotic Initiation Factors Gene Family AT2G46290 75.305 0.0 508