Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi188g00094 ATGATGCAGACAGTTGTGAATGCTGTCAGATGTTCTATGTACATTTTTTTCTTAAACTTCTATCTCTTACACCTACAACTGATTGCTGTGGCCGATAAGCCCAGTTATGTTCCCTCAGAGAACATAGTTCTCAACTGTGGCTCTAACACAACTGAGTTTGTACAATATGATGGTAGGAACTGGACTGGTGACATTGCTTCACCATATGTTCCCTCTAATGCAGACATCAACTCCCTAATAGCCACAGCCCCTCCTACACTTCAATCCATTCCTCAAGTTCCCTATATGACTGCTCGCATCTTTCACTCTCAATTCACCTACAGATTCAATGTAACCCCAGGTCCAAAATTCATACGCCTTCACTTCTACCCAGCTTCCTACTTGGATCTCAATATCTCCAAAGCTTTCTTATCAGTCACTGCTGGTAACTTCACTCTTCTCCATAACTTTAGTGTTTCCCTCAATGCTGACTACTTAAACTTAGCATATTTCATGAAGGAATTCATTGTTCATGTAAATGGGAGCACTTTAGAACTTTCCCTTACCCCATCATCCAATGCTTCTGATGCCTATGCATTCGTGAATGGGATTGAAGTTGTTTCAATGCCCCTTGGTTTATACATTCGTGGTGATGATGCCCCTCTTCCTTTAGTTGGTCACGATCAAACATTGGTGTACATTCATAATGATTCCGCCATGGAAAGCTTATACAGATTGAATGTAGGAGGTGAGCAAATTCTACCCAAATATGATACGGCTATGTTTCGCACTTGGGACACTGATGATAGTTACATACTTGGAGCTAATATAGGTATTCAACCTTTTAATATAAGCATGCCAGTTGTGTATACAAATAATGTTCCAGCATATACTGCCCCTGAAAGCGTCTATAGAACATCCTGTTCAATGGGTCCCTTTGAGAACGGCCTTGTCAATTTAAATTACAACCAAACGTGGTTTTTTCCTGTTGATTCTGGCTTCAATTATCTAGTTAGGCTTCACTACTGTGAAGTTTTTAACGATATAACAAAGATCAATGAGGTAGTTTTTTCTGTATTTTTAAATAATCAAACAGCTGAAGAGCTGTTTGATCCAATTGCCGCAAGTGGGGGGCCTGGAGTTGCTGTGTACCGAGACTATGTTGTGATGGTTCCCGACAATGGTGAGGGAAAGCAGGATCTGTGGCTAGACTTGCATCCAAACAAGGATACTAAACCTGTGTACTACAATGCATTCTTGAATGGTGTAGAGATCTTTAAACTGAGTTTTGTTGATAAGAAGAATCTTGCAGGGCTTAACCCATCCATAAGGAAGTTTGGACCAGCTGTAAAGGCTCCCCATGTAGCACAGATTAAGCATTCAAAGAAACTCACATTCATCCTCATTGGATGTGGACTTGGTGCAGTGGTGGCACTACCAATTCTCCTGTGCTTAGTTCTATACAGGTTGAAGGTGATTAGACCAACAAGGATCATGTCATGGTGCGGTCTCATTGTCCTTCCACCCAATCAGGCAAACAAGTCATCATTTGGCAATCATTTTTCATTGAGAAAGATAAAAGTGGCAACATATGACTTTGATGAGGCTCTAATCATAGGCACAGGAGGATTTGGAAGTGTTTACAAGGGTAGCTTTGATGGTGGGGATACTTTTATAGCCATAAAACGTGGCAATCCAATGTCAGAACAAGGTGTTATAGAATTTGAGACAGAGATCCATCTGCTCTCACAGCTCCGGCACAACAACCTAGTCTCACTTTTAGGTTCTTGCAATGAAGATGGGGAGATGATATTGGTCTATGATTTCATGGCCAATGGAACTCTCTATGACCATCTTCACTTGAGGCAGAGAGATCAACCTCCTTTGTCATGGACTCAACGTCTTGAGATATGCATTGGAGTTGCAAGAGATGAAGATGATGAGCATGTAAACTTGGCTGAATGGGCTGTGTTTTGCTTTGAAAATGACAATGTAGAGCAAATGGTGGACCCCAACTTAGAAGGAAACATAGTTAAGGAGTGCTTTGAATTATATTTAGAAGTTGCAATGAAATGTTTGGCAGAACAAGGGGTGGAGAGGCCATCCATTGGTGATGTGCTCCAGAACCTTGTTCTGGCATTGCAACTTCAGAAAAATCCTGGTACTTCCCGAGATGGAAATGTACATAGGAATGATAACACTGGTTTGCAGGGCTATTCAGATTTGACACCTGGGGTCGAGTTCTCTGAAATCACGATGCCTGTTGGCCGGTAA 2253 0.4154 MMQTVVNAVRCSMYIFFLNFYLLHLQLIAVADKPSYVPSENIVLNCGSNTTEFVQYDGRNWTGDIASPYVPSNADINSLIATAPPTLQSIPQVPYMTARIFHSQFTYRFNVTPGPKFIRLHFYPASYLDLNISKAFLSVTAGNFTLLHNFSVSLNADYLNLAYFMKEFIVHVNGSTLELSLTPSSNASDAYAFVNGIEVVSMPLGLYIRGDDAPLPLVGHDQTLVYIHNDSAMESLYRLNVGGEQILPKYDTAMFRTWDTDDSYILGANIGIQPFNISMPVVYTNNVPAYTAPESVYRTSCSMGPFENGLVNLNYNQTWFFPVDSGFNYLVRLHYCEVFNDITKINEVVFSVFLNNQTAEELFDPIAASGGPGVAVYRDYVVMVPDNGEGKQDLWLDLHPNKDTKPVYYNAFLNGVEIFKLSFVDKKNLAGLNPSIRKFGPAVKAPHVAQIKHSKKLTFILIGCGLGAVVALPILLCLVLYRLKVIRPTRIMSWCGLIVLPPNQANKSSFGNHFSLRKIKVATYDFDEALIIGTGGFGSVYKGSFDGGDTFIAIKRGNPMSEQGVIEFETEIHLLSQLRHNNLVSLLGSCNEDGEMILVYDFMANGTLYDHLHLRQRDQPPLSWTQRLEICIGVARDEDDEHVNLAEWAVFCFENDNVEQMVDPNLEGNIVKECFELYLEVAMKCLAEQGVERPSIGDVLQNLVLALQLQKNPGTSRDGNVHRNDNTGLQGYSDLTPGVEFSEITMPVGR 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi188g00094 750 PANTHER OS03G0124300 PROTEIN-RELATED 15 482 IPR046957 GO:0004672
Sebi188g00094 750 Gene3D Transferase(Phosphotransferase) domain 1 510 636 - -
Sebi188g00094 750 ProSiteProfiles Protein kinase domain profile. 526 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi188g00094 750 FunFam FERONIA receptor-like kinase 231 422 - -
Sebi188g00094 750 FunFam receptor-like protein kinase FERONIA 500 602 - -
Sebi188g00094 750 Gene3D Transferase(Phosphotransferase) domain 1 637 712 - -
Sebi188g00094 750 FunFam FERONIA receptor-like kinase 41 203 - -
Sebi188g00094 750 Gene3D - 41 203 - -
Sebi188g00094 750 Gene3D - 231 422 - -
Sebi188g00094 750 Pfam Protein tyrosine and serine/threonine kinase 532 636 IPR001245 GO:0004672|GO:0006468
Sebi188g00094 750 ProSitePatterns Protein kinases ATP-binding region signature. 532 555 IPR017441 GO:0005524
Sebi188g00094 750 Pfam Malectin-like domain 44 420 IPR024788 -
Sebi188g00094 750 SUPERFAMILY Protein kinase-like (PK-like) 516 636 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi188g00094 Sebi-Chr188 1472882 1475413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi188g00094 641 712 Receptor kinase-like Gene Family AT3G51550 55.556 1.10e-20 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi188g00094 Malectin_like 1.3e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi188g00094 - - gmx:100776859 962.6