Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi188g00042 ATGGCCATGGCAAGTAACAACCCTAACCTTGTAGTTATCATCTTTGTGTTGCTCTTAGTGGCATTCCCGCATGCCTCCGGTGAAGAATGCGAGTCAAAATACGAGGGAGCGTGCCACAACAAGAGTATGGCCCTCAAGTTGAAGATTATTGCCATTTTCTGCATACTAATCACAAGCATGATTGGCATTTGTCTCCCTATCTTCTCCGGTGCGGTTCCTGCTCTTCAACCGGACGGAAACCTCTTCGTGCTCGTGAAGGCCTTCGCATCAGGAGTCATACTCGCCACCGGTTACATGCACGTGATGCCAGATTCCTTCGATGATCTCACTTCACCGTGCTTGCCACAACGTCCCTGGCACAAGTTCCCCTTCACCACCTTCATCGCCATGCTCTCCGCCGTTTTCACTCTCATGGTTGATTCCTTCTCTATCAGCTTCTTCAAGAAGAAACTCTCTTCCTCTTCTTCTGCCACGTCATTGGAAGCAGCACGTGCGGCCGAGCCCAAGGAATTGGAACAATTTGGCCATAGTCATGGCCTTGCACATGTGAAGGGCGTGAATGCAGAACAGTTGCTACGATACCGTGTTGTGTTGGAGCTAGGGATTGTGGTACACTCGGTGGTGATTGGTTTATCAATGGGAGCATCGGAGAATCCATGCACGATTAGGCCTCTCATTGCTGCACTTTGCTTCCATCAACTCTTTGAGGGAATGGGCTTGGGCGGTTGCATACTTCAGGCTGAATATGGATTCAATGTGAAAGCGGTTATGATTTTCTTCTTCTCTGCAACGACGCCGTTTGGGATCGCTTTGGGGATTGGTTTGTCCAAAGTGTATAGCGACACTAGTCCAACTTCTCTTATTGTGGAGGGGATTCTAAATGCTGTATCTGCTGGGCTTTTGAATTATATGGCGTTAGTTGATTTATTGGCTTCTGATTTTATGGGGCCTAAGCTGCAAGGTAGAATGAAGCTTCAGATTTGGTCTTACGTGGCAGTTTTGTTAGGGGCAGGAGGCATGTCTGTCATGGCAATTTGGGCATAG 1044 0.4828 MAMASNNPNLVVIIFVLLLVAFPHASGEECESKYEGACHNKSMALKLKIIAIFCILITSMIGICLPIFSGAVPALQPDGNLFVLVKAFASGVILATGYMHVMPDSFDDLTSPCLPQRPWHKFPFTTFIAMLSAVFTLMVDSFSISFFKKKLSSSSSATSLEAARAAEPKELEQFGHSHGLAHVKGVNAEQLLRYRVVLELGIVVHSVVIGLSMGASENPCTIRPLIAALCFHQLFEGMGLGGCILQAEYGFNVKAVMIFFFSATTPFGIALGIGLSKVYSDTSPTSLIVEGILNAVSAGLLNYMALVDLLASDFMGPKLQGRMKLQIWSYVAVLLGAGGMSVMAIWA 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi188g00042 347 PANTHER ZINC/IRON TRANSPORTER 44 343 - -
Sebi188g00042 347 Pfam ZIP Zinc transporter 46 344 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Sebi188g00042 347 NCBIfam ZIP zinc/iron transport family 30 347 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi188g00042 Sebi-Chr188 633417 634552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi188g00042 12 347 Inorganic Solute Cotransporters AT1G31260 57.821 2.34e-137 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi188g00042 K14709 - gmx:100784872 474.552