Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi188g00039 ATGGTTCCTAGTGAGATCAGAGGAGTCCACTATCTAGCACCTGAGAACCCATTCCTAATTCCACCCAACTTTGGCTTTCCACAGAGTGACATCCAAAACTTCCATCTGAATACCCTCTTAAGCAGCTTGCCAAATTGCCACTTCCCATCAGCAGGCCATGAATTTGCTCCTCCTTCATGCCTCAGCAGCAACTCAACTTCTGATGAAGCAGATGAACTTCAGTTCAACATCATAGATGAAAGGAAACACAGGAGAATGATATCTAACAGAGAATCAGCTCGCAGATCAAGGATGAGGAAACAAAAACACTTGGATGAACTGTGGTCACAGGTGGTCAGACTCAGAACTGAGAACCACAACCTTATTGACAAACTGAACCATATGTCTGAGTCTCATGACAAAGCTGTCCAAGAGAATGCACGCCTCAAGGAAGAAACTTGTGATCTTCGCCAAATGATAGCAGACATGCAAATTGGAAACTCTTTTGCTTGCACCATGGGAGATTTTGAGGAAGTTCCATGCAACACATCTCAACTCAAATCTGATTCCACAAACCAATCAATCACTCCTGCGGACTTGATTCATGAATGA 591 0.4365 MVPSEIRGVHYLAPENPFLIPPNFGFPQSDIQNFHLNTLLSSLPNCHFPSAGHEFAPPSCLSSNSTSDEADELQFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLIDKLNHMSESHDKAVQENARLKEETCDLRQMIADMQIGNSFACTMGDFEEVPCNTSQLKSDSTNQSITPADLIHE 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi188g00039 196 CDD bZIP_plant_GBF1 82 133 IPR045314 GO:0003700|GO:0006355
Sebi188g00039 196 MobiDBLite consensus disorder prediction 176 196 - -
Sebi188g00039 196 Coils Coil 125 145 - -
Sebi188g00039 196 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 8 162 IPR044521 -
Sebi188g00039 196 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 79 142 IPR004827 GO:0003700|GO:0006355
Sebi188g00039 196 SMART brlzneu 77 141 IPR004827 GO:0003700|GO:0006355
Sebi188g00039 196 SUPERFAMILY Leucine zipper domain 81 130 IPR046347 GO:0003700|GO:0006355
Sebi188g00039 196 Pfam bZIP transcription factor 81 136 IPR004827 GO:0003700|GO:0006355
Sebi188g00039 196 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 84 99 IPR004827 GO:0003700|GO:0006355
Sebi188g00039 196 Gene3D - 79 136 - -
Sebi188g00039 196 FunFam BZIP transcription factor 79 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi188g00039 Sebi-Chr188 581477 582067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi188g00039 27 169 bZIP Transcription Factor Family AT3G30530 54.491 1.08e-49 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi188g00039 bZIP_1 1.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi188g00039 - - gmx:778126 341.658