Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi188g00035 ATGCTCTTACGTGGCATCATCTCAACTCCTCTCCCATCCTCTCTGCGGCTTCGCCTCGCAACGCCGAGTCAGCCACGAAACGTCAGCGTTTCATCCCGGCTCCATGGCGATTACCCGCTGTCGGTGTCTGACGAGACGCTCGAGTCACGAGGGTTCGTGCTGCGGCGGAGTGTGGAGGGGCTGAACATTGAGGAATTGAACGGCGTTTTCGTGGCGGTGGGGTTTCCGAGGCGGGACCCGGAGAAGATACGTGTGGCGCTGGAGCACACGGAGTCGATTGTTTGGGTGGAGCAGCGGAAGACGCGGCGTGCGATAGCGTTCGCGAGGGCCACAGGGGACGGTGTATTCAACGCGATTATATGGGACGTGGTGGTGGACCCTTCCTTTCAAGGGATTGGGCTCGGCAAGGCCGTTGTGGAGAGGCTCATTCAGGACCTCTTGCGCAAAGGCATTTCCAATATTTCTCTCTACTCTGAGCCGCGTGTTCTCGGGTTCTATAGACCTTTGGGCTTTGTTGCTGACCCTGATGGTATTAGAGGAATGGTTTATTCCAGAAAACAAAAACAAAAACAAAAGAAAAGATAG 585 0.5538 MLLRGIISTPLPSSLRLRLATPSQPRNVSVSSRLHGDYPLSVSDETLESRGFVLRRSVEGLNIEELNGVFVAVGFPRRDPEKIRVALEHTESIVWVEQRKTRRAIAFARATGDGVFNAIIWDVVVDPSFQGIGLGKAVVERLIQDLLRKGISNISLYSEPRVLGFYRPLGFVADPDGIRGMVYSRKQKQKQKKR 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi188g00035 194 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 62 175 IPR016181 -
Sebi188g00035 194 Coils Coil 186 194 - -
Sebi188g00035 194 FunFam Putative acetyltransferase NSI 57 184 - -
Sebi188g00035 194 Pfam Acetyltransferase (GNAT) family 86 171 IPR000182 GO:0016747
Sebi188g00035 194 Gene3D - 56 185 - -
Sebi188g00035 194 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 53 189 IPR000182 GO:0016747
Sebi188g00035 194 PANTHER ACYL-COA N-ACYLTRANSFERASE 30 189 IPR045039 GO:0008080
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi188g00035 Sebi-Chr188 551452 552036 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Sebi188g00035 Acetyltransf_1 7.3e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi188g00035 K22450 - gmx:100778613 279.256