Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi188g00032 ATGTTTGGCTTTCTTGGTGTCACCAGACTGTATGCAAGTGACCCTCCACTAACACTGGATTACTATGCATCAACTTGCCCCACTCTGTTTGATATTGTTAGGAAGGAAATGGAATGTGCAGTGCTTTCTGATCCCCGTAACGCAGCCTCCATAGTTCGGCTTCACTTCCATGACTGCTTTATTCAGGGATGCGATGGATCAATTTTGCTTGATGATACAGTGACAATTAAAGGTGAGAAGAAAGCAGCTACCAACATCCACTCTCTGAAAGGCTTCGGACTTATTGATCGAATCAAGAACTTGGTTGAATCAGAGTGTCCCGGAATTGTTTCCTGCGCTGATATTCTCACTATTGCAGCTAGAGATGCTGTGATTCTGGTTGGTGGACCATATTGGGATGTTCCTGTGGGAAGGAAGGATTCTGTCACTGCAAGTTTTGAACTTGCCACTACCAATCTTCCCACTCCGGATGAGAGCCTTGTCTCTATCATCCCCAAGTTTCTTTATCAAGGCCTATCAGTCACTGATATGGTAGCACTTGTAGACCAAGAAATGTACTCAAGTGTGTTTGGAATTGGAACAAGAGAGCTTGTCAAGAAGTATGCAGCAGATCCTCTGGCTTTCTTCCAGCAATTCTCTGATTCAATGGTGAAAATGGGAAATATCACAAATTCAGAAAGCTTCATCACTGGAGAAGTTAGGAAGAACTGCAGATTTGTGAACACATAA 729 0.4335 MFGFLGVTRLYASDPPLTLDYYASTCPTLFDIVRKEMECAVLSDPRNAASIVRLHFHDCFIQGCDGSILLDDTVTIKGEKKAATNIHSLKGFGLIDRIKNLVESECPGIVSCADILTIAARDAVILVGGPYWDVPVGRKDSVTASFELATTNLPTPDESLVSIIPKFLYQGLSVTDMVALVDQEMYSSVFGIGTRELVKKYAADPLAFFQQFSDSMVKMGNITNSESFITGEVRKNCRFVNT 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi188g00032 242 CDD secretory_peroxidase 17 240 IPR033905 GO:0004601|GO:0042744
Sebi188g00032 242 Gene3D Peroxidase, domain 2 184 219 - -
Sebi188g00032 242 Gene3D - 220 241 - -
Sebi188g00032 242 Gene3D - 20 153 - -
Sebi188g00032 242 ProSitePatterns Peroxidases active site signature. 48 59 IPR019794 GO:0004601
Sebi188g00032 242 ProSiteProfiles Plant heme peroxidase family profile. 16 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi188g00032 242 PANTHER PEROXIDASE 72-RELATED 182 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi188g00032 242 SUPERFAMILY Heme-dependent peroxidases 17 241 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi188g00032 242 PRINTS Haem peroxidase superfamily signature 128 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi188g00032 242 PRINTS Haem peroxidase superfamily signature 48 62 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi188g00032 242 PRINTS Haem peroxidase superfamily signature 110 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi188g00032 242 PRINTS Plant peroxidase signature 90 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi188g00032 242 PRINTS Plant peroxidase signature 175 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi188g00032 242 PRINTS Plant peroxidase signature 26 45 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi188g00032 242 PRINTS Plant peroxidase signature 109 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi188g00032 242 PRINTS Plant peroxidase signature 128 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi188g00032 242 PRINTS Plant peroxidase signature 50 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi188g00032 242 Pfam Peroxidase 33 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi188g00032 242 FunFam Peroxidase 20 162 - -
Sebi188g00032 242 Gene3D Peroxidase, domain 2 154 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi188g00032 Sebi-Chr188 498928 501679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi188g00032 151 242 Peroxidase AT1G68850 54.348 4.16e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi188g00032 K00430 - gmx:100780750 330.872