Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi186g00041 ATGCCTTCAACTACTTTTCAATGGCTAAGCCTTGTAGGCATTATTTGGCTCCAAGCTATAAATGGGACAAACACCAATTTTCCTGCTTACTCCTCCCAGCTAAAGCAACTCCTTTCCATGTCCCAAGTGCAGCTCAACAACCTTGCTTTTGCCTCTGATGCAGGCAAACTTTTTGGCTGTTTTTCTGGTATAGCTGCTGTTTACCTCCCACTTTGGCTTGTCCTCATGATTGGTTCAACTCTTGGGTTAATTGGTTATGGGAATAGCATTTGTTGGATTAACACTGTTTGCTATGTTGTCACTATAAGGAACTTCTCATCTGATCGCCAAGTTGCTGTGGGGTTAACCACTAGTTACCAAGGATTAATGAGCAGCTTGCAATTTGTCTCAAGCAAAATATCTCCACTGGGTAACCTTATTGGTATTCTAGTATCCCTTTTGTTCCCTCTATTAGTTCCTGTTTCCATGAAGATAAGTGCACTAGTTGGGTTGTGGCACACAAAAAGAGAAAGACTAAGAGTCTATCATTTAACAGTGGAGAATCAGACCCCAAATGAAGAGAGGACAGATAATGAAGTGAAAGAGGGTGAAAATAACAGAGAAGTTCAAGAAATAGTATTTCTTAATAACTTGGGACAAATAGCTGAATCCAGGGGTTGCTCTGGTACTTCATCTTTGGTTTCTTTGTCTTCCTCTTTTGGGTTCTTTGGCCGTCTCATGCCATCTCTCATGGACTACTTTTACAGGGGTCAGTGTAGAATATCAAGACCAGCTTCAATGGTGGCATTGATGGCTCCAATAGCCGGGGCATTTTTTTTACTTCTCAATAAAACTCACTTAGCACTTTATATTAGCACTGCCATAATTGGAGTGTGCACTGGAGCAATTACTTCTATTTCTGTTTCCACCACCACAGAGCTATTTGGGACAAAGAATTTCTCTGTGAACCACAATGTGCTAGTGGCAAATATTCCAGTGGGATCATTTTTGTTTGGTTACATGGCTGCAATTATTTACCATATGGAAGGGCATGAACATGGGAAATGCATGGGCATGGAATGTTATAGAAATACTTTCATCATATGGGGTTCCCTTTGTTTCTTTGGCACTTTCTTGGCTTTGATTCTACAAGCTAGAACTCGTAAGTTTTACTCACAAAAAGCAATAGAGTAA 1173 0.4041 MPSTTFQWLSLVGIIWLQAINGTNTNFPAYSSQLKQLLSMSQVQLNNLAFASDAGKLFGCFSGIAAVYLPLWLVLMIGSTLGLIGYGNSICWINTVCYVVTIRNFSSDRQVAVGLTTSYQGLMSSLQFVSSKISPLGNLIGILVSLLFPLLVPVSMKISALVGLWHTKRERLRVYHLTVENQTPNEERTDNEVKEGENNREVQEIVFLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLMPSLMDYFYRGQCRISRPASMVALMAPIAGAFFLLLNKTHLALYISTAIIGVCTGAITSISVSTTTELFGTKNFSVNHNVLVANIPVGSFLFGYMAAIIYHMEGHEHGKCMGMECYRNTFIIWGSLCFFGTFLALILQARTRKFYSQKAIE 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi186g00041 390 Pfam Nodulin-like 7 87 IPR010658 -
Sebi186g00041 390 Coils Coil 389 390 - -
Sebi186g00041 390 SUPERFAMILY MFS general substrate transporter 234 382 IPR036259 -
Sebi186g00041 390 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 206 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi186g00041 Sebi-Chr186 1265869 1267801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi186g00041 205 387 Nodulin-like Gene Family AT2G30300 55.851 5.59e-63 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi186g00041 - - gmx:100808034 391.734