Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi186g00016 ATGGATTTTTTGCACAGTCCGACAACATTTCAAACAATACACGGGATGTCATTTTGGGAGTATGCCAATCGTCAGCCGATATATAATAACTTATTCAATGATGGCATGGAAAGTGATGCTCGATTAGTCATCAGTGTGGTGATGGAGAAGTGCAATGAGGTATTTAATGGAGTGGAGTCATTGGTTGATGTTGGGGGAGGCACAGGGACTATGGCAAAGGTCATTGCTAAATCATTCCCAAAGATGGAGTGCATTGTATTTGATCTGCCACATCTTGTTACTGGCTTGGAAGGAAGTGAGAACCTAAAATATATTAGTGGGGACATGTTTAAGGCAATTCCTCCTGCAGACACCATTCTATTGAAGATTATCATAGACATGGTCATGGATAATGGGATGGAAGACGATGAATCAGTTGAAACACAACTTTTCTTTGATACGATGACGATGGTGATGTTAAATGGAAAAGAAAGAAATAAGAAAGAATGGGATAAGTTGATTTCCTCTGCCGGTTTCAGAGATTTCAAGATAACTCCAATTTTGGGCTTAAGGTCTCTCATTGAGATTTATCCGTAG 576 0.3958 MDFLHSPTTFQTIHGMSFWEYANRQPIYNNLFNDGMESDARLVISVVMEKCNEVFNGVESLVDVGGGTGTMAKVIAKSFPKMECIVFDLPHLVTGLEGSENLKYISGDMFKAIPPADTILLKIIIDMVMDNGMEDDESVETQLFFDTMTMVMLNGKERNKKEWDKLISSAGFRDFKITPILGLRSLIEIYP 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi186g00016 191 Gene3D Vaccinia Virus protein VP39 124 191 IPR029063 -
Sebi186g00016 191 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 5 189 IPR029063 -
Sebi186g00016 191 PANTHER O-METHYLTRANSFERASE 9 174 IPR016461 GO:0008168
Sebi186g00016 191 Pfam O-methyltransferase domain 8 125 IPR001077 GO:0008171
Sebi186g00016 191 Gene3D Vaccinia Virus protein VP39 3 123 IPR029063 -
Sebi186g00016 191 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 191 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi186g00016 Sebi-Chr186 513826 515041 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi186g00016 10 177 Monolignol Biosynthesis Gene Families AT5G54160 28.934 1.43e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi186g00016 - K16040 gmx:100781008 269.24