Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi186g00011 ATGACATCAAAGCTAAAGTGGAGGCTGCTTGTCCCGGAGTTGTTTTCTTGTGCTGATATTCTAGCTATTGCTGCTCGTGATTCTGTTGTTGCTCTGGGAGGTCCATCATGGAATGTTGCGTTAGGCAGAAGAGATTCAACCACAGCAAGTAAAGATGCTGCCACCAAGGATATCCCATCCCCACTAATGGATCTTAGTGCCCTTATATCTGCTTTTGCACAGAAGGGCTTTAACACTCAGGAAATGGTAGCCCTTGCAGGAGCTCACACAACAGGGCAAGCCAGGTGTCAGTTATTCAGAGGCAGGCTTTATAATGAAACAAACATAGAGTCAAATTTTGCAACATCACTCAAGCCAAACTGTCCAAGCTCTAGTGGTGATAGTAACCTTTCCCCACTTGATGTCACCACCAGTGTGATATTTGACAATGCTTATTTCAAGAATTTGATTAACAAAAAGGGACTTCTACATTCAGATCAACAGTTATTCAGTGGTGGTTCTACAGACTCTCAGGTCACTACATATAGCAATGACCCTGCAGCTTTCTATGCAGACTTTGCTAGTGCCATGGTGAAAATGGGAAACCTTAGCCCTCTAACAGGGAAAAGTGGCGAGATTCGTACTAACTGCCACAAAGTTAACTAA 645 0.4357 MTSKLKWRLLVPELFSCADILAIAARDSVVALGGPSWNVALGRRDSTTASKDAATKDIPSPLMDLSALISAFAQKGFNTQEMVALAGAHTTGQARCQLFRGRLYNETNIESNFATSLKPNCPSSSGDSNLSPLDVTTSVIFDNAYFKNLINKKGLLHSDQQLFSGGSTDSQVTTYSNDPAAFYADFASAMVKMGNLSPLTGKSGEIRTNCHKVN 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi186g00011 214 PRINTS Plant peroxidase signature 14 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00011 214 PRINTS Plant peroxidase signature 33 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00011 214 PRINTS Plant peroxidase signature 80 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00011 214 PRINTS Plant peroxidase signature 188 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00011 214 PRINTS Plant peroxidase signature 148 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00011 214 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00011 214 PRINTS Haem peroxidase superfamily signature 15 32 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00011 214 PRINTS Haem peroxidase superfamily signature 81 96 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00011 214 PRINTS Haem peroxidase superfamily signature 134 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00011 214 PRINTS Haem peroxidase superfamily signature 33 45 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00011 214 FunFam Peroxidase 59 193 - -
Sebi186g00011 214 Gene3D - 12 214 - -
Sebi186g00011 214 ProSiteProfiles Plant heme peroxidase family profile. 1 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00011 214 Pfam Peroxidase 12 178 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00011 214 Gene3D Peroxidase, domain 2 59 193 - -
Sebi186g00011 214 PANTHER PEROXIDASE 72-RELATED 12 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00011 214 CDD secretory_peroxidase 16 213 IPR033905 GO:0004601|GO:0042744
Sebi186g00011 214 SUPERFAMILY Heme-dependent peroxidases 7 214 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi186g00011 Sebi-Chr186 281861 284089 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi186g00011 12 214 Peroxidase AT5G05340 63.415 1.23e-92 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi186g00011 K00430 - gmx:100777191 366.311