Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi186g00009 ATGACCAAAAATATTTTATATGTTAATAACTCAAACAAGGGTTGTGATGGATCAGTTCTACTGGATGACACCCCTTACTTCGTGGGTGAGAAGACTGCACTTCCAAATATGAACTCAATTAGAGGTTTTGAAGTTGTTGATGAAATTAAAGCAGCAGTTGACAAAGCATGTAAAGGCCCTGTAGTATCATGTGCAGATATCTTAGCAATAGCAGCTCGTGACTCTGTAGCAATATTGGGTGGTCCAAAATTTTGGTACAAAGTGTTATTAGGCAGAAAAGATGCAAGATATGCAAGCAGGGATGCTGCAAATGTCAATCTTCCACCCCCATTTTTCAACTTCTCACAGCTTCTTTTCAGTTTCCAATCTCATGGGTTGAACCTTAAAGACCTTGTGGTTCTCTCTGGTGGCCACACCATTGGATTTGCACAGTGTAGTTCCTTCAGAGACAGGATCTTCAATGACCCAACATAG 474 0.4051 MTKNILYVNNSNKGCDGSVLLDDTPYFVGEKTALPNMNSIRGFEVVDEIKAAVDKACKGPVVSCADILAIAARDSVAILGGPKFWYKVLLGRKDARYASRDAANVNLPPPFFNFSQLLFSFQSHGLNLKDLVVLSGGHTIGFAQCSSFRDRIFNDPT 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi186g00009 157 PANTHER PEROXIDASE 72-RELATED 13 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00009 157 Gene3D - 13 107 - -
Sebi186g00009 157 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00009 157 PRINTS Haem peroxidase superfamily signature 62 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00009 157 PRINTS Haem peroxidase superfamily signature 130 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00009 157 Gene3D Peroxidase, domain 2 108 155 - -
Sebi186g00009 157 PRINTS Plant peroxidase signature 41 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00009 157 PRINTS Plant peroxidase signature 129 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00009 157 PRINTS Plant peroxidase signature 61 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00009 157 PRINTS Plant peroxidase signature 1 21 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00009 157 SUPERFAMILY Heme-dependent peroxidases 13 157 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi186g00009 157 Pfam Peroxidase 13 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00009 157 ProSiteProfiles Plant heme peroxidase family profile. 13 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00009 157 ProSitePatterns Peroxidases proximal heme-ligand signature. 130 140 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi186g00009 Sebi-Chr186 245898 248004 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi186g00009 14 155 Peroxidase AT5G05340 61.972 2.22e-56 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi186g00009 K00430 - gmx:100810852 228.024