Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi186g00008 ATGGGTTCTCATGACCAAAATATTCTTGTGCTTGTTATGGTCACGTTGGCAACATTTGTGATCCCTAGCTATGGAATACTGCTGACTCCTGATTACTATAACAAAGTGTGCCCACAGGCACAGCCAATCATAAAGTCAATTGTTTTGAAGGCAATTATTCGTGAACCACGCATTGGAGCATCCTTGCTGCGTTTGCATTTCCATGACTGCTTTGTTAACGGTTGTGATGGATCAGTTCTACTAGATGACACCCCTTTCTTCATCGGTGAAAAAACCGCACCTCCAAATAATAACTCGCTTAGAGGTTTTGAGGTGATTGATGAAATTAAAGCAGCAGTTGATAAAGCTTGCAAAGGTCCTGTGGTATCATGTGCAGATATCTTAGCCATAGCAGCTCGTGATTCTGTAGCCTTATTGGGAGGTCCACAATTTTGGTACAGAGTGTTATTAGGAAGAAGAGATGCAAGATATGCAAGCATCAAGGATACAAAAAATCTTCCTCCCCATTTTTCAGCCTCTCAGAGCTTCTTTCCAATTTCCAATCTCATGGATTGGACCTTAAAGACCTTGTGTTCCTTCAAAGACAGGATCTTCAATGACACCAACATAGACTACAAATTTGCTTCCACTCTGCGAAAGACATGCCCAAAAATTGGCCATAATAGCAATTTAGCACCACTTGATGCTACTCCTGCTAAATTTGACACTACTTACTATAAGGCTTTGTTGTACAAAAAGGGTCTTCTTCATTCTGATCAAGAGCTTTTCAAAGGTGATGGTTCTGAAAGTGATAGATTGGTGTATCTATACAGTCAGAATCCTTATGCTTTTGCTAAAGACTTTGGAGTTTCAATGATCAAGATGGGTAATATTAGGCCTCTTACTGGGAAAATGGGTGAGATAAGGTTGTAA 912 0.4013 MGSHDQNILVLVMVTLATFVIPSYGILLTPDYYNKVCPQAQPIIKSIVLKAIIREPRIGASLLRLHFHDCFVNGCDGSVLLDDTPFFIGEKTAPPNNNSLRGFEVIDEIKAAVDKACKGPVVSCADILAIAARDSVALLGGPQFWYRVLLGRRDARYASIKDTKNLPPHFSASQSFFPISNLMDWTLKTLCSFKDRIFNDTNIDYKFASTLRKTCPKIGHNSNLAPLDATPAKFDTTYYKALLYKKGLLHSDQELFKGDGSESDRLVYLYSQNPYAFAKDFGVSMIKMGNIRPLTGKMGEIRL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi186g00008 303 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Sebi186g00008 303 SUPERFAMILY Heme-dependent peroxidases 28 302 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi186g00008 303 Gene3D Peroxidase, domain 2 192 289 - -
Sebi186g00008 303 Gene3D - 290 302 - -
Sebi186g00008 303 PANTHER PEROXIDASE 72-RELATED 27 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00008 303 FunFam Peroxidase 31 175 - -
Sebi186g00008 303 CDD secretory_peroxidase 28 303 IPR033905 GO:0004601|GO:0042744
Sebi186g00008 303 Pfam Peroxidase 48 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00008 303 Gene3D - 28 179 - -
Sebi186g00008 303 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00008 303 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00008 303 PRINTS Haem peroxidase superfamily signature 227 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00008 303 PRINTS Plant peroxidase signature 241 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00008 303 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00008 303 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00008 303 PRINTS Plant peroxidase signature 225 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00008 303 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00008 303 PRINTS Plant peroxidase signature 283 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00008 303 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00008 303 ProSiteProfiles Plant heme peroxidase family profile. 27 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi186g00008 Sebi-Chr186 230797 233448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi186g00008 28 302 Peroxidase AT5G05340 52.218 2.22e-92 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi186g00008 K00430 - gmx:100810852 391.349