Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi186g00007 ATGGGAGCATCTCTGCTGCGTTTGCATTTCCATGATTGCTTCGTTAATGGGTGTGATGGATCCATTCTGTTAGATGACACACCTAACTTCACTGGAGAGAAGACTGCTTTTCCAAATGTTAATTCAGTCAGAGGATTTTCAGTGGTTGATGATATCAAAGCAGCAGTTGACAAAGCTTGCAAACACCCTGTGGTGTCATGTGCAGATATCTTAGCCATAGCAGCTCGTGATTCTGTATCCATATTGGGAGGTCCACACTATTGGTACCAAGTATTGTTAGGCAGAAGAGATGCAAGGACAGCAAGCAGGGATACTGCAAATGCCAATCTTCCTCAGCCAACTTTCAGCTTCTCACAACTCCTATCTAATTTCAATTTTGTTGGATTGGACCTAAAAGACCTTGTAGCCCTTTCTGGTGGCCACACAATTGGACTTGCTAGGTGCACTGCTTTCAGGAACAGGATTTACAATGACACAAACATAAACCCAAACTATGCAGCAGCTGTGAGGAAACAATGTCCTAGAAGTGGTGGAGATAACAATTTAGTACCATTTGATGGCACAACTGGGGTGGTTGACACTGCTTACTATTCAGCTTTGTTACATAAAAAGGGTCTTCTCCACTCTGATCAAGAATTGTTCAAGGGACAGGGGAGTGAAAGTGACAAATTGGTGCATCTATATAGTAGCAATCCACTTGCTTTTGCTAAAGACTTTGGAGCTTCAATGATTAAGATGGGTAACATAAAGCCTCTTACTGGGAATCAGGGTGAGATCAGAAGCAATTGCAGAAGGGTCAATTAG 804 0.4254 MGASLLRLHFHDCFVNGCDGSILLDDTPNFTGEKTAFPNVNSVRGFSVVDDIKAAVDKACKHPVVSCADILAIAARDSVSILGGPHYWYQVLLGRRDARTASRDTANANLPQPTFSFSQLLSNFNFVGLDLKDLVALSGGHTIGLARCTAFRNRIYNDTNINPNYAAAVRKQCPRSGGDNNLVPFDGTTGVVDTAYYSALLHKKGLLHSDQELFKGQGSESDKLVHLYSSNPLAFAKDFGASMIKMGNIKPLTGNQGEIRSNCRRVN 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi186g00007 267 CDD secretory_peroxidase 1 266 IPR033905 GO:0004601|GO:0042744
Sebi186g00007 267 SUPERFAMILY Heme-dependent peroxidases 1 267 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi186g00007 267 ProSitePatterns Peroxidases proximal heme-ligand signature. 133 143 IPR019793 -
Sebi186g00007 267 PANTHER PEROXIDASE 72-RELATED 1 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00007 267 FunFam Peroxidase 111 246 - -
Sebi186g00007 267 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00007 267 PRINTS Plant peroxidase signature 132 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00007 267 PRINTS Plant peroxidase signature 199 216 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00007 267 PRINTS Plant peroxidase signature 241 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00007 267 PRINTS Plant peroxidase signature 64 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00007 267 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00007 267 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00007 267 PRINTS Haem peroxidase superfamily signature 85 97 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00007 267 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00007 267 PRINTS Haem peroxidase superfamily signature 65 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00007 267 PRINTS Haem peroxidase superfamily signature 133 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00007 267 Gene3D Peroxidase, domain 2 111 246 - -
Sebi186g00007 267 Pfam Peroxidase 1 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00007 267 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
Sebi186g00007 267 ProSiteProfiles Plant heme peroxidase family profile. 1 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00007 267 Gene3D - 1 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi186g00007 Sebi-Chr186 151059 153666 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi186g00007 1 267 Peroxidase AT5G05340 61.481 1.54e-112 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi186g00007 K00430 - gmx:100816056 432.18