Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi186g00003 ATGGCACTTTCTTGCTCTAAATCTTCTTCTTTCTCATCATCACCAACCAATTTTGCCTTAGCTTTGTTGATGTTTTTGCTTATAGGGAGTTCCTCTGCTCAACTCTCTGAGAACTTCTATGTTAAGAGGTGTCCTAAGGTTTTCAATGCTGTCAAATCTGTTGTTCAATCAGCTGTAGCTAAAGAACCTCGCATGGGAGCATCTCTTCTTCGCCTCTTCTTTCATGACTGCTTTGTCAATGGTTGTGATGGGTCAGTACTACTTGATGACACTTCTTCCTTCAAAGGAGAGAAGACTGCACCTCCTAACAATCATTCTTTGAGAGGTTTTGAAGTCATTGATGCCATAAAGTCTAAGGTGGAGGCAGTATGCCCTGGTGTGGTGTCATGTGCTGATATTGTAGCAATTGCTGCTCGTGACTCTGTTGCAATTCTTGGAGGGCCTTTTTGGAAGGTTAAACTTGGAAGAAGGGATTCAACGACAGCCAGCTTCCAAACTGCAAGCAATGTGCTTCCATCTCCCTTTTCTGACCTTAGCACTCTTATCTCAAGATTTCAAGATCAAGGGCTCTCTACCAAAGACATGGTTGCCTTATCCGGAGCCCACACAATTGGAAAGGCAAGATGTTCTAGTTACAAAACACGTGTATACACTGATACCAACATTGACAAGTCATTTGCAAAGGCAAGGCAGAGGAACTGTCCAAGGATTAATGACACAGCAAGAGACAATAATGTAGCAGTCCTAGACTTCAAAACTCCCAATCACTTTGACAACATGTACTACAAGAACCTCATCAACAAAAAGGGACTCCTTGATTCCGATCAGGTTCTCTTCAATGGAGGGTCTACTGATTCATTGGTTATAACTTACAGCAACAATCCCAAGGCATTTGAATATGACTTTGTTACTGCAATGATTAAGATGGGAGACATCCAACCTTTAACTGGGTCAAATGGGCAGATTAGGAAGCAGTGCAGGTTTCCTAATTAG 993 0.422 MALSCSKSSSFSSSPTNFALALLMFLLIGSSSAQLSENFYVKRCPKVFNAVKSVVQSAVAKEPRMGASLLRLFFHDCFVNGCDGSVLLDDTSSFKGEKTAPPNNHSLRGFEVIDAIKSKVEAVCPGVVSCADIVAIAARDSVAILGGPFWKVKLGRRDSTTASFQTASNVLPSPFSDLSTLISRFQDQGLSTKDMVALSGAHTIGKARCSSYKTRVYTDTNIDKSFAKARQRNCPRINDTARDNNVAVLDFKTPNHFDNMYYKNLINKKGLLDSDQVLFNGGSTDSLVITYSNNPKAFEYDFVTAMIKMGDIQPLTGSNGQIRKQCRFPN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi186g00003 330 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00003 330 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00003 330 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00003 330 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00003 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00003 330 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00003 330 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00003 330 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00003 330 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi186g00003 330 ProSiteProfiles Plant heme peroxidase family profile. 34 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00003 330 Pfam Peroxidase 51 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00003 330 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Sebi186g00003 330 FunFam Peroxidase 172 309 - -
Sebi186g00003 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Sebi186g00003 330 SUPERFAMILY Heme-dependent peroxidases 34 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi186g00003 330 Gene3D - 38 327 - -
Sebi186g00003 330 FunFam Peroxidase 38 175 - -
Sebi186g00003 330 Gene3D Peroxidase, domain 2 172 309 - -
Sebi186g00003 330 CDD secretory_peroxidase 34 328 IPR033905 GO:0004601|GO:0042744
Sebi186g00003 330 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00003 330 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00003 330 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00003 330 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00003 330 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi186g00003 330 PANTHER PEROXIDASE 72-RELATED 29 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi186g00003 Sebi-Chr186 31390 92330 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi186g00003 18 330 Peroxidase AT5G58400 63.376 1.28e-145 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi186g00003 K00430 - gmx:100812478 493.812