Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi185g00033 ATGCTATTGAGTGGAGTGATGGGTTTGGTGGGAGGAAGGGGTTTCGCTGGTTTAGATGATGACAGTGTCCGAGTCTCTGCTGTTCTCACAAATGCTCCTTTCATGCTGAACTTGGATTGTGATCACTATGTCAATAACAACAAGGCAGCCCGAGAAGCCATATGCTTTTTGATGGATCCTCAAACTAGGAAGAAGGTCTGCTATGTCCAGTTTCCTCAGAGAGTTGATGGTATTGATACTCATGATCATTATGCCAACAGGAACACAATTTTCTTTGATATTAACATAAAGGGTCTAGATGGTATTCAGGGTCCTGCTTTTGGAAAAGTTATTGCTGTGAGTGACATAACTGGAGCCATAAAGAACAACAAAGGTATTGACATCCCAATCCTACTCAAGCATTCCAAAGACCACCCATTTTTCTTTGCTATTTTAGTTCCATTCTGA 447 0.4139 MLLSGVMGLVGGRGFAGLDDDSVRVSAVLTNAPFMLNLDCDHYVNNNKAAREAICFLMDPQTRKKVCYVQFPQRVDGIDTHDHYANRNTIFFDINIKGLDGIQGPAFGKVIAVSDITGAIKNNKGIDIPILLKHSKDHPFFFAILVPF 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi185g00033 148 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 23 106 - -
Sebi185g00033 148 Pfam Cellulose synthase 16 107 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi185g00033 Sebi-Chr185 1327736 1328918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi185g00033 16 107 Cell Wall Biosynthesis AT5G17420 79.348 1.82e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi185g00033 K10999 - gmx:100815436 167.933