Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi185g00006 ATGGATGGGAACAAGGACGACGCGTTGAAATGCTTGAAAATCGGTAAAGAGGCATTAGAAAACGGCGATCGTACCCGCGCGTTGAAGTTCGTAACCAAAGCTCGCCGCCTGGACCCCACTCTTCCCGTCGACGATCTATTGTCCGCGATAGAGAACGATGCAGGCGATCAACCCCCTGCAGCTTCCGCTGAGCCGGCGAAGCCCGCCGCGGATAACCCTTCCATCCGCCGAAGGCCTTCTGCAGCAGCCGCGGCGCCAGGGCCTTCGTCGTCGCCCTCACCATCACCAGCCACATTCACTGAGGAGCAAATTTCAATTATCAGGGAAATTAAGCGGAAGAAGAACTATTACGAGATTTTAGGGTTAGAGAAGAATTGCACTGTGGAGGACGTGAGGAAATCTTATAGAAAACTGTCTCTGAAGGTTCATCCTGACAAGAACAAAGCCCCGGGTGCAGAGGAGGCGTTTAAGGCCGTGTCAAAGGCGTTTCAGTGTCTTAGTAATGAAGAGAGTAAGAAGAAGTATGATCTTTCAGGAGAAGATGAATCTGTTTATGAGAGACGTGCTGCGGCGAGGCCAGGGGCGGCTAGGGCTTATAATGGCTACTATGAAGCTGATATTGATGCTGAGGAGATATTTAGGAACTTCTTCTTTGGAGGAATGGCTCCTGCTGCTAATTTTGGAGGGTTTAGTTTTGGACCAGGGATGCCTCATAGGCATGCTGAACATGGCTCTGGTGGTTTCAATGTTCGTGCTCTGGTTCAGTTGCTTCCTGTTCTGCTCATTTTGCTTATAAACTTTTTGCCTGGATCGGATCCAATTTATACACTTTCTCAGAATTATCCTTATGAACATCGAATGACTACACCAAAGGGTGTTAACTATTATGTTAAGTCCACAAAGTTTGCTCAGGATTATCCGCTGGGTAGCCGTGAACGTGACACAGTTGAGGGGAGGGTTGAGAGGGAATACTTTGGCATTCTTCGCCAGAACTGCCAGTTTGAGTTGCAGCGTCGCCAGTGGGGATATATCCGTGAAACCCCACACTGTGATATGCTTCGGAAGTTTGAAGTGGTGAATTGA 1083 0.4885 MDGNKDDALKCLKIGKEALENGDRTRALKFVTKARRLDPTLPVDDLLSAIENDAGDQPPAASAEPAKPAADNPSIRRRPSAAAAAPGPSSSPSPSPATFTEEQISIIREIKRKKNYYEILGLEKNCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNEESKKKYDLSGEDESVYERRAAARPGAARAYNGYYEADIDAEEIFRNFFFGGMAPAANFGGFSFGPGMPHRHAEHGSGGFNVRALVQLLPVLLILLINFLPGSDPIYTLSQNYPYEHRMTTPKGVNYYVKSTKFAQDYPLGSRERDTVEGRVEREYFGILRQNCQFELQRRQWGYIRETPHCDMLRKFEVVN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi185g00006 360 CDD DnaJ 115 168 IPR001623 -
Sebi185g00006 360 FunFam Chaperone protein dnaJ 49 111 228 - -
Sebi185g00006 360 ProSitePatterns Nt-dnaJ domain signature. 156 175 IPR018253 -
Sebi185g00006 360 PRINTS DnaJ domain signature 151 171 IPR001623 -
Sebi185g00006 360 PRINTS DnaJ domain signature 135 150 IPR001623 -
Sebi185g00006 360 PRINTS DnaJ domain signature 117 135 IPR001623 -
Sebi185g00006 360 PANTHER AT29763P-RELATED 1 355 - -
Sebi185g00006 360 SMART dnaj_3 114 171 IPR001623 -
Sebi185g00006 360 Pfam Domain of unknown function (DUF1977) 270 340 IPR015399 -
Sebi185g00006 360 Gene3D DnaJ domain 111 226 IPR036869 -
Sebi185g00006 360 SUPERFAMILY Chaperone J-domain 111 233 IPR036869 -
Sebi185g00006 360 ProSiteProfiles dnaJ domain profile. 115 179 IPR001623 -
Sebi185g00006 360 Pfam DnaJ domain 115 176 IPR001623 -
Sebi185g00006 360 MobiDBLite consensus disorder prediction 48 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi185g00006 Sebi-Chr185 256383 257465 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi185g00006 110 176 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.845 1.29e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi185g00006 K09518 - gmx:100793797 528.865