Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi184g00063 ATGGCAAGAACTAAGCAAACTGCTCGTAAGTCCACCGGAGGAAAGGCACCGAGGAAGCAGCTTGCCACCAAAGCTGCCAGAAAATCAGCTCCGGCTACCGGAGGAGTGAAAAAGCCACACCGATTCAGGCCAGGGACGGTGGCTCTGAGGGAAATCAGGAAGTACCAGAAGAGCACGGAGCTTCTGATCCGAAAGCTTCCATTTCAGCGTCTGGTGAGGGAAATCGCTCAGGACCTTCAAGACCGATCTCCGGTTCCAGAGCAGCGCCGTCTCCGCCTTGCAGGAAGCAGCAGAGGCTTATCTGGGATAAGCAAAGAAAAGGAGACAGGACAGAGCAAACGTCAAGTTCTTGGAGATATTGGAAATCTTGGAGAACCTTGGAAGGATATTTCTCGACCCCTCCCAAGGAACCATGCAAAACTGTTGGCAAATGCACATGCTTCAGCAAACCTGGTACTCCAAGCTAATGAGCAAGGAGCTGCACAAGGGAATAAAAATGTTATTGTACCTTCACTTGACAATAGAGCACTTGTTCACAAGAAACATGGTGTGGAAGATTTGACTCACAAGCCAAATGTTGAGCCCGTAGATATGGTTAGTTATGAAGCTGGAGAAAAGGCTGATTCTGTTAGTAAAATAATGTCTAGGGAAAGATCTTGTAGGAAGGTCCAGACTCTGACTTCAGCACTTATTACACCAAGCAAGGCTACTCGCGGAATCTTGATTGAGCCAGAAAATCAGCCTGTTGACATTGATGCAGTCTATGCTAATGATGAACCAGAAGTAGCTGAATACCTTGATGATATATACAAATTCTATAAGCTATCAGAAGATAAGAACCAAGTTTCAGATTACATGAGATCACAGCCTGATATTAATGAGAAGATGAGGTTTATTACTGTGGACTGGCTGCTTGATGTGCATAGAAGATTTAAATTAATGCCTGAGACGCTATTTCTCACCATAAACATAATTGATCGGTACCTCTCATTGACAGTTGTACCAAGAACAGAATTACAGTTAGTGGGCATAAGCTCAATGTTCATAGCTAGTAAATATGAAGAAATTAAGCCTCCTCAGGTAGCACTCTGCTTTTCCAGGGTCACACATTGTGAACAATTCTGCTGA 1128 0.4441 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDLQDRSPVPEQRRLRLAGSSRGLSGISKEKETGQSKRQVLGDIGNLGEPWKDISRPLPRNHAKLLANAHASANLVLQANEQGAAQGNKNVIVPSLDNRALVHKKHGVEDLTHKPNVEPVDMVSYEAGEKADSVSKIMSRERSCRKVQTLTSALITPSKATRGILIEPENQPVDIDAVYANDEPEVAEYLDDIYKFYKLSEDKNQVSDYMRSQPDINEKMRFITVDWLLDVHRRFKLMPETLFLTINIIDRYLSLTVVPRTELQLVGISSMFIASKYEEIKPPQVALCFSRVTHCEQFC 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi184g00063 375 Pfam Cyclin, N-terminal domain 268 362 IPR006671 -
Sebi184g00063 375 SMART cyclin_7 302 375 IPR013763 -
Sebi184g00063 375 SUPERFAMILY Cyclin-like 258 363 IPR036915 -
Sebi184g00063 375 FunFam Histone H3 2 76 - -
Sebi184g00063 375 ProSitePatterns Histone H3 signature 1. 15 21 IPR000164 GO:0000786|GO:0003677|GO:0030527
Sebi184g00063 375 SMART h35 34 96 IPR000164 GO:0000786|GO:0003677|GO:0030527
Sebi184g00063 375 Gene3D - 282 362 - -
Sebi184g00063 375 FunFam G2/mitotic-specific cyclin 281 373 - -
Sebi184g00063 375 PRINTS Histone H3 signature 58 75 IPR000164 GO:0000786|GO:0003677|GO:0030527
Sebi184g00063 375 PRINTS Histone H3 signature 34 55 IPR000164 GO:0000786|GO:0003677|GO:0030527
Sebi184g00063 375 PRINTS Histone H3 signature 17 31 IPR000164 GO:0000786|GO:0003677|GO:0030527
Sebi184g00063 375 PRINTS Histone H3 signature 3 17 IPR000164 GO:0000786|GO:0003677|GO:0030527
Sebi184g00063 375 MobiDBLite consensus disorder prediction 81 113 - -
Sebi184g00063 375 SUPERFAMILY Histone-fold 2 83 IPR009072 GO:0046982
Sebi184g00063 375 ProSitePatterns Histone H3 signature 2. 67 75 IPR000164 GO:0000786|GO:0003677|GO:0030527
Sebi184g00063 375 MobiDBLite consensus disorder prediction 1 43 - -
Sebi184g00063 375 Pfam Core histone H2A/H2B/H3/H4 1 78 IPR007125 GO:0003677
Sebi184g00063 375 Gene3D Histone, subunit A 2 99 IPR009072 GO:0046982
Sebi184g00063 375 PANTHER HISTONE H3 1 81 IPR000164 GO:0000786|GO:0003677|GO:0030527
Sebi184g00063 375 Gene3D - 268 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi184g00063 Sebi-Chr184 1344721 1347587 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi184g00063 98 366 Core Cell Cycle Gene Families AT2G26760 39.781 4.10e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi184g00063 K21777 - cave:132164002 229.565