Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi184g00055 ATGGATTCTTCTGTTGTCATGGGTAGCACAATTTTGGAGCCTCGTAATGATATGGAATTTGAATCTCATGAAGCTGCATACGCATTTTACAAAGAATATGCTAAGTCTGCTGGGTTTGGTACTGCTAAGTTGAGCAGTCGTCGGTCCAGGGCATCGAAGGAATTTATTGATGCCAAATTTTCATGTATAAGATATGGTAATAAGCAGCAATCTGATGATGCAATTAATCCTCGCCCTTCTCCAAAAATTGGTTGTAAAGCTAGCATGCATGTGAAGAGAAGACAAGATGGTAAGTGGTATGTCTATAGCTTTGTGAAGGAGCATAACCATGAGCTTCTACCTGCTCAAGCTCATTTTTTTCGGAGTCACAGGAGTTCTGATCCACTAGAAGAGCAATTTGAAAAGCGATGGTGGAAGTTGGTTGACAGGTTCAACCTTAGAGATGTCGAATGGGTCCAATCCTTGTATGATGATCGTATATGTTGGGTGCCAACTTTTATGAGAGATATTTCTTTTGCTGGCTTGTCTACTAGTTTGCGCTCAGAGAGTTTAAATTCCCTGTTTGACAACTATGTCCAAGTTGACACTTCATTGAAAGAATTTATAGAACAGTACCGTGTGATTCTTGAAGACAGGCATGAAGAGGAAGCCAAAGCAAATTTTGATGCTTGGCATGAAACACCTGAATTGAAGTCTCCTTCTCCTTTTGAAAAACAAATGTTATTAGTATACACACATGAAATTTATAAAAAATTTCAGGTTGAGGTTTTGGGTGCTGCTGCTTGCCATCTTAAGAAAGAAAATGAAGGCTACCCTTGTAGACATGCTATTGTTGTTCTACAAATGTCTGGTGTTTTCAGCATCCCACCAAAGTATATTTTGCAAAGATGGACAAATGCTGCTATGAGCAGGCATCCAATTGGTGAAAAATTGGAAGAGGTTCAATCCAAGGTCCGGAGATTCAATGATTTATGTAGACGAGCGATTATATTGGGTGAAGAAGGATCTTTGTCACAAGATAGTTACTATATTGCTTTAGGTGCCATAAGTGAAGCTCTAAAGCAATGTGCAAATTTGAACAACTGTGTTGAGAATGGTATGAGACCTGATGCCTCAACTACCCATCTTGTTTGCAATGTTGAGGAAGAGTATCAATCTATTATTTCATCTAACAACAAGGTCCCTGATCCAAAAATGAATATGGGTAAGAAGGCTGCAAGGACTGGTGTAGCTGGTAGGAGTCTAGGAAGTGTTGAAAATATTGAAGGAAATAAAGGAAAGGTACCTCAGCTTGAAGCAATGAGTGGGAAAGATGGTTTTCAACAAATGGAGCCGACTGATCTGAGGTCACATAATGTCCTGCCAATGCAGTTTCAGAGTATGGTGCCAGCTCTATTTCATAATGTTTCATCACCGTTTCATACTGCAGCTTCAACTCATTTGCATGAAAATCGTCTTCCTCGTTAG 1467 0.396 MDSSVVMGSTILEPRNDMEFESHEAAYAFYKEYAKSAGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASMHVKRRQDGKWYVYSFVKEHNHELLPAQAHFFRSHRSSDPLEEQFEKRWWKLVDRFNLRDVEWVQSLYDDRICWVPTFMRDISFAGLSTSLRSESLNSLFDNYVQVDTSLKEFIEQYRVILEDRHEEEAKANFDAWHETPELKSPSPFEKQMLLVYTHEIYKKFQVEVLGAAACHLKKENEGYPCRHAIVVLQMSGVFSIPPKYILQRWTNAAMSRHPIGEKLEEVQSKVRRFNDLCRRAIILGEEGSLSQDSYYIALGAISEALKQCANLNNCVENGMRPDASTTHLVCNVEEEYQSIISSNNKVPDPKMNMGKKAARTGVAGRSLGSVENIEGNKGKVPQLEAMSGKDGFQQMEPTDLRSHNVLPMQFQSMVPALFHNVSSPFHTAASTHLHENRLPR 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi184g00055 488 Pfam FAR1 DNA-binding domain 29 114 IPR004330 -
Sebi184g00055 488 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 126 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi184g00055 Sebi-Chr184 1118404 1121714 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi184g00055 FAR1 7.6e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi184g00055 - - gmx:100805273 632.098