Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi183g00037 ATGGAGAGATACATGTTAATTAAGGAAGTTGGTGATGGAACATTTGGGAGTGTCTGGAGAGCCATTAATAAACAAAGTGGTGAAGTTGTTGCAATCAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCATTAAGAAAAATGAATCACCAAAATATCGTGAAGCTGAAGGAAGTTATTCGAGAAAGAATGCAACCTCTACCAACTTATGAAAACAGGGAAAAGCTGTTTTCTGAAGATGAAGTCAGAAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTACATGCACCAGCGTGGATACTTTCATCGTGATCTGAAACCTGAAAACTTGCTGGTCACCAAGGATATCATAAAAGTTTCTGATTTTGGGCTAGTTCGAGAGATCAGTTCACAACCACCCTATACAGACTACGTCTCCACACGGTGGTATCGTGCTCCTGAAGTCCTGCTTCAGTCTTACCTGTATAGCTCTAAAGTTGACATGTGGGCAATGGGTGCTATTATGGCTGAGTTGTTCACTCTCCGTCCTCTCTTTCCGGGTTCCAGTGAAGCAGATGAGATCTACAAAATATGCAGTGTGATAGGTAGTCCAACCAGTGAATCTTGGGCAGATGGACTCAAACTCGCTAGGGATATCAACTATGAATTTCCACAGCTTGCTAGTGTAAATCTCTCTGTACTGATCCCATCTAGAAGTGAGCATGCAATCAACCTTATCACATCACTTTGTTCATGGGATCCCTGCAAGAGACCAACAGCAACAGAGGCCCTTCAACATCCTTTCTTCCAGAGTTGCTTTTACATCCCTCCATCCCTTCGCACCAGAGCAGTGACCAGAACTCCTCCATCTGCTGGAACCAGGGGAGCACTGGATCGGCAAGGGGTTAGGAGATTCTCTGGTGCTTTGCCTAATTCAAAACTCACCAATAATTTTTCTTCCCCGAAATTACATCCTTCCTTAGCTTCAGGTGTGCAACGGAAGCTGGATATGGCCAATGAGGATGGAATTAAGAACAAGAAGTCATTGAAGACTACTCAACAATCAAAATATCAACCACCAGGAAAATACAGCCCTACTTCTATGAACAAGGGGAGGACTGCACGTGGTGTTTCAGTGACAGCTGAGAAGTTGGCCAATGTGTCTATTGGTACTCGAAGACAGTCCTTGGGGCAAACCCGTCCGCCTCCAATGAAGGCTGGAGTCAATTGGATTTCTGAATCTGGAAACTGCCTGCTCAGGCCAGCCCAACAGATTCCAACTGGTAGAACTTTCTCAAGAAAAGTTGCTGGATGA 1323 0.4399 MERYMLIKEVGDGTFGSVWRAINKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHQNIVKLKEVIRERMQPLPTYENREKLFSEDEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDIIKVSDFGLVREISSQPPYTDYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELFTLRPLFPGSSEADEIYKICSVIGSPTSESWADGLKLARDINYEFPQLASVNLSVLIPSRSEHAINLITSLCSWDPCKRPTATEALQHPFFQSCFYIPPSLRTRAVTRTPPSAGTRGALDRQGVRRFSGALPNSKLTNNFSSPKLHPSLASGVQRKLDMANEDGIKNKKSLKTTQQSKYQPPGKYSPTSMNKGRTARGVSVTAEKLANVSIGTRRQSLGQTRPPPMKAGVNWISESGNCLLRPAQQIPTGRTFSRKVAG 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi183g00037 440 SUPERFAMILY Protein kinase-like (PK-like) 1 276 IPR011009 -
Sebi183g00037 440 Pfam Protein kinase domain 4 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi183g00037 440 Gene3D Phosphorylase Kinase; domain 1 1 76 - -
Sebi183g00037 440 FunFam CMGC family protein kinase 1 80 - -
Sebi183g00037 440 SMART serkin_6 4 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi183g00037 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 110 122 IPR008271 GO:0004672|GO:0006468
Sebi183g00037 440 CDD STKc_MAK_like 4 272 - -
Sebi183g00037 440 MobiDBLite consensus disorder prediction 345 376 - -
Sebi183g00037 440 Gene3D Transferase(Phosphotransferase) domain 1 77 278 - -
Sebi183g00037 440 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Sebi183g00037 440 FunFam serine/threonine-protein kinase MAK isoform X1 76 282 - -
Sebi183g00037 440 ProSiteProfiles Protein kinase domain profile. 4 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi183g00037 440 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 330 - -
Sebi183g00037 440 MobiDBLite consensus disorder prediction 351 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi183g00037 Sebi-Chr183 1053870 1058481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi183g00037 1 279 Core Cell Cycle Gene Families AT3G48750 34.007 1.27e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Sebi183g00037 Pkinase 8.3e-65 CL0016