Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi183g00004 ATGGAGTGTGCAAGAATCACCCAATGGCTAAATCTTCTACTATGTGCATTTCTATTGCTAAAGGCTGAAGGAGATTTTATTCCACTCACCCTTGTTGAGAATGCCGTATCAAAAGGAGCTGTTTGTTTGGATGGCAGTCCCCCAGCTTACCACCTTGATAAGGGATATGGAGAAGGAAATAACAGCTGGATTGTTCACATTGAGGGAGGAGGATGGTGCGAAAGTGTGACTGCTTGCCTCAACCGTAAAGACACTTATTTAGGTTCATCTAACCGAATGACTGAGCAACTTGGCTTTTATGGATATCTAAGTAACGATAAACATTTTAATCCAGATTTCTACAATTGGAATAGAGTCAAGATTAGGTACTGTGATGGGGCATCGCTTACTGGTGATGTGGAAAAAGTTGATCCAAAAACCAAGTTGTACTTCAGAGGAGCAAGGATTTTTGTTGCTGTAATAGAAGAATTACTAGCGAAAGGAATGAAAAATGCTAAAAATGCTATTCTTTCTGGATGTTCAGCTGGAGGATTGGCTGCTATATTGAACTGTGATCGCTTTAAAGCACTATTACCTGCTGGAACTACAGTAAAATGCGTTTCAGATGCTGGGCTCAGCAAAGCATTTGCCTCCATCCTGTACTTCAAGACTCAGTCCAGGGCTAACTACAGGGTGGAATTCATAAAGGCATTGAGTGCAATAGGCAAGTCTCCATCTAACGGAATGTTTATAGACTCTTGCTATGCCCACTGCCAAACAGAACCACCACAGACATGGTTCACCAGTGACTCTCCACAGCTTGCCAATAAAACAATTGCCAAGGCTGTAGGAGACTGGTTTTATAAACGAAGTCCTTTCCGAAAGATAGATTGCTCTTACCCTTGCAACCCTACTTGCTATGGCCATACTTTTGATAATTTTGAACCATAA 930 0.4161 MECARITQWLNLLLCAFLLLKAEGDFIPLTLVENAVSKGAVCLDGSPPAYHLDKGYGEGNNSWIVHIEGGGWCESVTACLNRKDTYLGSSNRMTEQLGFYGYLSNDKHFNPDFYNWNRVKIRYCDGASLTGDVEKVDPKTKLYFRGARIFVAVIEELLAKGMKNAKNAILSGCSAGGLAAILNCDRFKALLPAGTTVKCVSDAGLSKAFASILYFKTQSRANYRVEFIKALSAIGKSPSNGMFIDSCYAHCQTEPPQTWFTSDSPQLANKTIAKAVGDWFYKRSPFRKIDCSYPCNPTCYGHTFDNFEP 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi183g00004 309 Pfam Pectinacetylesterase 218 285 IPR004963 GO:0016787
Sebi183g00004 309 Pfam Pectinacetylesterase 21 205 IPR004963 GO:0016787
Sebi183g00004 309 PANTHER NOTUM-RELATED 222 300 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi183g00004 Sebi-Chr183 51042 54532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi183g00004 222 304 Carbohydrate Esterase AT4G19420 44.068 9.05e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi183g00004 K19882 - gmx:100811212 314.694