Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi183g00003 ATGGAGAGTGGAAGAATCACCCTATGGTTAAATCTTCTAGTATGTGCAATTATACTGCTAAAGGCTGAAGGAGATTTTGTTCCAATCACTCTTGTCGAGAATGCAGTGTCAAAAGGAGCTGTTTGTTTGGATGGCAGTCCCCCAGCTTACCACCTTGATAACGGATTTGGAGAAGGAATTAACAGCTGGATTGTTCACATTGAGGGAGGGGGATGGTGTGAAAGTGTCACTACTTGCCTTAACCGTAAGGACACTCGTTTAGGTTCATCTAACCAAATGGTTGAGCAAATTGCCTTTTCTGGATATCTAAGTAATGATAAACAGTTTAATCCAGATTTCTATAATTGGAACAGAGTCAAGATTAGGTACTGTGATGGGGCATCATTTACTGGTGATGTGGAAAAAGTTGATCCAACAACCAACTTGCACTTCAGAGGAGCAAGGGTTTTTGTTGCTGTAATAGAAGATTTACTAGCGAAAGGAATGGAAAATGCTGAAAATGCTATTCTTTCTGGATGTTCAGCTGGAGGATTGGCTACTATATTGAATTGTGATCGCTTTAAAGCACTATTACCTGCAGGAGCTAAAGTAAAATGTGTTTCAGATGCTGGTTATTTTATCAATGTAAAGGATATCTCAGGAGCACAACACATTGAAGAGTTCTACAAGCAAGTTGTTACAACACATGGCTCAGCAAAGCATTTGCCTCCTTCCTGCACTTCAAGACTCAGTCCAGAGTTGTGCTTTTTCCCCCAAAATATGGCATCAGAAATCAGCGCACCAATCTTCTTGGTAAATGCAGCCTATGACTCATGGCAGATTAAGAACATCTTAGCACCAGGTGTAGCTGATCCCCATGGCCTTTGGCGTAACTGCAAGCTTGATATAAACAACTGCTCACCTGACCAACTAAGTATAATGCAAGACTTCAGGATGGAATTCAAAAAGGCATTGAGTGTGATAGGCAACTCTCCATCTAACGGAATGTTTATAGACTCTTGCTATGTCCACTGCCAAACAGAATCACAAGAGACATGGTTCACAAGTGACTCTCCACAGCTTGCCAACAAAGTAAGAGACTGCATTCTTTGCTCCCTTCTCCAGAAAATGAGCGTTTTTGTGTGGCTTTTGGTTATTACTGTCTTTCACTTTATATCCAATTCAAAAGCTTAA 1173 0.4084 MESGRITLWLNLLVCAIILLKAEGDFVPITLVENAVSKGAVCLDGSPPAYHLDNGFGEGINSWIVHIEGGGWCESVTTCLNRKDTRLGSSNQMVEQIAFSGYLSNDKQFNPDFYNWNRVKIRYCDGASFTGDVEKVDPTTNLHFRGARVFVAVIEDLLAKGMENAENAILSGCSAGGLATILNCDRFKALLPAGAKVKCVSDAGYFINVKDISGAQHIEEFYKQVVTTHGSAKHLPPSCTSRLSPELCFFPQNMASEISAPIFLVNAAYDSWQIKNILAPGVADPHGLWRNCKLDINNCSPDQLSIMQDFRMEFKKALSVIGNSPSNGMFIDSCYVHCQTESQETWFTSDSPQLANKVRDCILCSLLQKMSVFVWLLVITVFHFISNSKA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi183g00003 390 PANTHER NOTUM-RELATED 15 358 IPR004963 GO:0016787
Sebi183g00003 390 Pfam Pectinacetylesterase 21 357 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi183g00003 Sebi-Chr183 43733 46988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi183g00003 5 359 Carbohydrate Esterase AT4G19420 65.634 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi183g00003 K19882 - csin:114309641 574.704