Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi183g00001 ATGGGATCCAATGGTAGCAAAGCCACTTCCTCTTGTAGTTCCTCTACTACTTCGTCTTCTTCAGGGAGTTTCAGGAAGGGTCGATCTAAGGGCCTTAGAGGTCTTCATTCTTTTTGTCTTGGAACAAGTTCTGGATCTCACGACAGTGATAATGAAGATCAGGCTTGTGATCAGAATAAAGTAAATGGCAGTGATATTGCATACACAGATGACAATGAAACAGATTCAGATGAGGTGAAAACAGAGTCTTTTAGAAAGGTTAAAGCTGGTGAGATGACTTGTATGCCTTCTAACATTGACCTAGAAGAATGGGGTGAAACAAGCATCCCCAACACTTCGTCCAGAACTGGCAGCAGCTCTGTCCATGCTTCTTCAACTCATTCCTTGAACCCTAGAAATCGATTGCTTTCTCGGTTTAGCCTCATTCCTGGACCTTCTGGCAGTTTGATTAACACAAATGAAACTCAACAATGTAATGACTTGCATCCTACATCTTTTTTCACTCAAATACCTACACAGTGTCATGAAGATGCTTCTAATAATTTAAGGTCAAATGCCCCGGCATCAGGTTTGCCTAGCAACTTGCAGAGCAATCCCACAGGTGGAGATGGTACAAGAGGAGAACTGGATATAAATTTATTTTCTCCGAGAATTCAAGCAGAGACAGAAAATGTTGAGACTAGACATATGGGTCGACGAAATGGAGCTCGAGAGCCTGTTGAAAGGAATGTTCGTTTTAGCCGAACTTTAAGTGTTGGAAGGCTTCGTGACAGAGTTCTTCGTCGATCAACATTATCCGACCTCAGCTTTTGCCCTCTGCAACAAGAGAGAGAACTGAGAGATGCTAGTCAGGATACAGGAAGGCAAGCAGTGGAGGGAGATTCAAGAGTGTCACCATCTGATAATAGTGCTCTTAATTCCTCTTCTACATCCGGATATCCTCTATCTAGTATGTCTAACTCCATGCTTAGTATCCAAGATTATGAAGTCGAGACTTCACGATCAAGAGAAGGAAGGTATCAGGATCTGCTGGAACATAGGTCCAATTTCCTTGAACGGAGAAGGAGAATACGGTCACAGGTTCGTGCTCTTCAGCGGTTGGGTAGCCGGTTTGAAAATCTCTCTGGACATGACAGATCATGTATCTTATCTGGTCAACATAGAAATGGTCGTTGTACATGCCGAATCAGAAATCGTGACACTAATTCAAACGATGATACCAATGCGAGAGCTAGCATATCAAGAATTGTTATGCTTGCAGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTAGTTTTATCTTCCCATCCTTCTGTGTCTTCTATTGGATCTGTTCCTGCACCTAATGATGTTGTGGAGTCCTTGCCCGTCAAACTATATGAGAAAAAACATAAGCAGCAAGAAGATGCTGCACA 1427 0.4261 MGSNGSKATSSCSSSTTSSSSGSFRKGRSKGLRGLHSFCLGTSSGSHDSDNEDQACDQNKVNGSDIAYTDDNETDSDEVKTESFRKVKAGEMTCMPSNIDLEEWGETSIPNTSSRTGSSSVHASSTHSLNPRNRLLSRFSLIPGPSGSLINTNETQQCNDLHPTSFFTQIPTQCHEDASNNLRSNAPASGLPSNLQSNPTGGDGTRGELDINLFSPRIQAETENVETRHMGRRNGAREPVERNVRFSRTLSVGRLRDRVLRRSTLSDLSFCPLQQERELRDASQDTGRQAVEGDSRVSPSDNSALNSSSTSGYPLSSMSNSMLSIQDYEVETSRSREGRYQDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGRCTCRIRNRDTNSNDDTNARASISRIVMLAEALFEVLDEIHQQSVVLSSHPSVSSIGSVPAPNDVVESLPVKLYEKKHKQQEDAA 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi183g00001 475 MobiDBLite consensus disorder prediction 1 26 - -
Sebi183g00001 475 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 144 - -
Sebi183g00001 475 MobiDBLite consensus disorder prediction 1 81 - -
Sebi183g00001 475 MobiDBLite consensus disorder prediction 288 318 - -
Sebi183g00001 475 MobiDBLite consensus disorder prediction 102 129 - -
Sebi183g00001 475 MobiDBLite consensus disorder prediction 177 207 - -
Sebi183g00001 475 MobiDBLite consensus disorder prediction 104 129 - -
Sebi183g00001 475 MobiDBLite consensus disorder prediction 277 318 - -
Sebi183g00001 475 MobiDBLite consensus disorder prediction 177 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi183g00001 Sebi-Chr183 24606 27679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi183g00001 34 473 C3H Transcription Factor Family AT5G45290 45.770 2.15e-84 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi183g00001 - - gmx:100800896 625.55