Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi182g00132 ATGGATGTCTGGAACGATGATTTTACGGAGCTGGAGACTGGGAGTTCGGTTGAGTCGTTTCAGAGGTTTTTGGTTTCGCAGAAAGAGCTCTTCCATAGCCAGATCGATCAGTTTCAAGAGATTGTCGTCACGCAATGCAAACTCACTGGCGTCAATCCTCTCTCTCAAGAAATGGCAGCTGGTGCTCTATCAATAAAAATTGGTAAAAGACCTAGGGATTTATTAAATCCAAAGGCTGTGCATTACATGCAATCAGTTTTTTCCATTAAAGATACAGTTAGCAAGAAAGAATCTCGTGAGATCAGTGCTTTATTTGGTGTTACAGTGACACAGGTGCGTGACTTTTTCACGAGTCAACGTTCAAGAGTAAGGAGGCTAGTTCAGTTGTCAAGGGAGAGGGCATTAAGATCTAATTCTTGTGAAGAATCTAATGATGGGCAAATAAACTCTGATCCTTTGAGACCAATAAATCCAGCTCCCTTAAACTCTGCTGGCCCTACCAATTCTGAAGAAGCATCTTGTTCAACACAGGAAGCAGCTTTGTCTGACCTAGATGACTTAGATAAACAATTTGTTGAGAACATTTTTAGTCTGATGCAGAAAGAGGAAACATTTTCTGGGCAGGAGAGATTGATGGAGTGGATATTGTCGATACAGAATTTTTCAGTGTTGTTGTGGTTTCTAACCAGAGGTGGTGCAATGACTTTAGTAACTTGGTTGAGTACAGCAGCTGTTGAAGAGCAAACAAGTGTCCTTCTTCTTATCTTGAAGGTTCTTTGTCATTTGCCTTTACATAAAGCCCTTCCTACTCACATATCAGCTATATTGCAGAGTGTTAATAGACTAAGGTTCTACAGGACATCAGACATATCAAACAGGGCAAGGATTTTGTTATCGAAGTGGAGCAAACTATTAGCAAGGAACCAAGCAATAAAGAAACCTAATGGTGTTAAACCTTCTGGTGATAGTAAAAAAGACATAATGCTTTCTCAGAGTATTGGTCAAATTATGGGCTCTGGATCCTGGCATTCAAATATTGATGTTCCTGAAGATATTCTTGCTCTCTCAAATGAAAGTTCAGATAATTTCAGGAAACTGGAATCTCCTGTGAAATTGTTACAACCCAGCTCAGATGATTCTAATAAGAAACCCACCCTTGGTGTATCTTCTTCTCAAGCTAGGGAGCGCAGGAAAGTGCAATTGGTGGAACAGCCAGGCCAAAAATCAGTTAGTAGAAGCCCACAGGTGGCAAGAGCAGGCTCTGTAAGTCAAGGTCGTCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCGTTATTTATGCAGAGTAAGTATGGGAAAACTGGTTCTTCAAAAGAAAGTAAAGACGCAAAAATTGACGGTCTGAATAAACCTCAGACAAATCAGGCCAGTATTGCAATTTGCTCTTCTAAAGTTCCTGTTCCACCTAAAATTGAAGAAGACAAGAAACCTCTGTTACTTCCCTCTAAAACCACTAATAGGCTGGACGCATCTTATTCTAAACCGAAAATGGATTTGAAGGAACCTCTCTGGGAGAAGTGCAAGAGGGTGCAAATCCCATGGAAAACACCAGCAGAAGTGAAACTTAAAGATTCCTGGAGAGTTGGTGCTGGTGCAAATAGCAAAGAGGTTGATGCCCAGGAAAACAGAAACCGCAGGGACAAGGAATCTATTTATCATAGTGTCCAAGAGATGCCATCTAACCCCAAGGAGCCATGGGATCTCGAAATGGACTATGATGACACTTTGACACCGGGAATTCCTATTGAACAGCTACCAGATGGTGATGGTGCAGAAATAGCAGTTTCCCCCAATCAGGTTGCAACTCATGCTATTCATGGGGTGGCCTCCACATCTTCAACCGTTAATGCAGCAACTGCTGAACCTGATTTAGAATTACTTGCCGTACTGCTGAAAAATCCAGAATTGGTATTTGCCTTAACTTCTGGACAAGCTGGTAGCATACCAAATCAGGAAACCCTGAAGCTGCTTGACATGATTAAGAGAGGCACTGTGAACAACTCTGGTTTAAGTGAAAATACAAATGGCAATTATGGCATGAGTGCAAAGGCCCCAGAGAAGGTTGAAGTTTCTCTCCCATCTCCAACTCCTTCAAGCGATCCAAGAACGAGTGGATGGAGCACAGAAGCACCAAAGAATCCTTTTTCACGGCGAAGTTCAGCACCTGATAGAGCTATCCACAACTCTGCTGCAGTGGTAACTACCAACTTAGTATCTCAGATTCCTATAACTAGCACTACAGTAAGGCAACAGCCAACAGTTGTGGCTCCATCTTCGAAACAGCTAACCAGCAGAACAGTTTCTCCATATTCACTGCCTCATGCAACTAATATTATTCCTGAAAAGCAATCATCACTAGCTCTTTCCTCTGTGCATGCATCCTCTGATATAAGTTTAACCATGAAGAACATAATCACTGCAAATGGACCTTCAGTTAACTTACCTGGTGCACATTCATCTTTAGCAATGCGGGCTGATGGCACGAGTAATGTAAAACCAGTACCTAATTTGAGTTTACAAGAGGGTTTGTCTAATTCATACCCTCAATCCTTCATGTTGGCCTCACCAACGCCATCACATTCAGCAACACAACAACAAAGACATCCACATTTGCTCCATCAGGCCCATTATACTGAACCTTCATATCGTAACACTGTCCATTCCTATCCACCACAAATCGAAAAATCAGGACCTGTGTCAGATTTGTGGAGAGTTAGGCAGGATGTGTCTTCCAGTTATCATTCTCAACGAAATCATAGCAACTATAATACGTATGGTGGGGGATCCATGCAATCTGGTTCATGGGATAGAAATAATCAAGGAAGGGAAGAATTTGAATCATGGAGTCCGGAGAATAGTCCAACTAGAAATCCTAGGTATGTTCCAGGTAGAAATGTTCAAGAGTCAAGAATGAATCATGTTAGAAATCATAGACCTGAATGGTCAAGGCAGCGGGGTTCTTCTGGACACTGGGACCCTGGTAGTGGTAGGCATGGGAACAAAAGGTGGCATGATCAGAGACGTTGA 3075 0.4218 MDVWNDDFTELETGSSVESFQRFLVSQKELFHSQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVHYMQSVFSIKDTVSKKESREISALFGVTVTQVRDFFTSQRSRVRRLVQLSRERALRSNSCEESNDGQINSDPLRPINPAPLNSAGPTNSEEASCSTQEAALSDLDDLDKQFVENIFSLMQKEETFSGQERLMEWILSIQNFSVLLWFLTRGGAMTLVTWLSTAAVEEQTSVLLLILKVLCHLPLHKALPTHISAILQSVNRLRFYRTSDISNRARILLSKWSKLLARNQAIKKPNGVKPSGDSKKDIMLSQSIGQIMGSGSWHSNIDVPEDILALSNESSDNFRKLESPVKLLQPSSDDSNKKPTLGVSSSQARERRKVQLVEQPGQKSVSRSPQVARAGSVSQGRPMSADDIQKAKMRALFMQSKYGKTGSSKESKDAKIDGLNKPQTNQASIAICSSKVPVPPKIEEDKKPLLLPSKTTNRLDASYSKPKMDLKEPLWEKCKRVQIPWKTPAEVKLKDSWRVGAGANSKEVDAQENRNRRDKESIYHSVQEMPSNPKEPWDLEMDYDDTLTPGIPIEQLPDGDGAEIAVSPNQVATHAIHGVASTSSTVNAATAEPDLELLAVLLKNPELVFALTSGQAGSIPNQETLKLLDMIKRGTVNNSGLSENTNGNYGMSAKAPEKVEVSLPSPTPSSDPRTSGWSTEAPKNPFSRRSSAPDRAIHNSAAVVTTNLVSQIPITSTTVRQQPTVVAPSSKQLTSRTVSPYSLPHATNIIPEKQSSLALSSVHASSDISLTMKNIITANGPSVNLPGAHSSLAMRADGTSNVKPVPNLSLQEGLSNSYPQSFMLASPTPSHSATQQQRHPHLLHQAHYTEPSYRNTVHSYPPQIEKSGPVSDLWRVRQDVSSSYHSQRNHSNYNTYGGGSMQSGSWDRNNQGREEFESWSPENSPTRNPRYVPGRNVQESRMNHVRNHRPEWSRQRGSSGHWDPGSGRHGNKRWHDQRR 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi182g00132 1024 SMART HOX_1 68 130 IPR001356 GO:0003677
Sebi182g00132 1024 MobiDBLite consensus disorder prediction 927 954 - -
Sebi182g00132 1024 MobiDBLite consensus disorder prediction 708 731 - -
Sebi182g00132 1024 MobiDBLite consensus disorder prediction 682 738 - -
Sebi182g00132 1024 MobiDBLite consensus disorder prediction 554 569 - -
Sebi182g00132 1024 MobiDBLite consensus disorder prediction 682 696 - -
Sebi182g00132 1024 MobiDBLite consensus disorder prediction 373 395 - -
Sebi182g00132 1024 MobiDBLite consensus disorder prediction 138 172 - -
Sebi182g00132 1024 MobiDBLite consensus disorder prediction 369 430 - -
Sebi182g00132 1024 Gene3D - 68 125 - -
Sebi182g00132 1024 MobiDBLite consensus disorder prediction 927 1024 - -
Sebi182g00132 1024 MobiDBLite consensus disorder prediction 404 422 - -
Sebi182g00132 1024 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 106 1007 - -
Sebi182g00132 1024 MobiDBLite consensus disorder prediction 986 1001 - -
Sebi182g00132 1024 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Sebi182g00132 1024 MobiDBLite consensus disorder prediction 961 978 - -
Sebi182g00132 1024 MobiDBLite consensus disorder prediction 547 581 - -
Sebi182g00132 1024 SUPERFAMILY Homeodomain-like 68 130 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi182g00132 Sebi-Chr182 1394372 1402988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi182g00132 479 734 Homeobox Transcription Factor Family AT4G02560 47.266 1.23e-49 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi182g00132 - - gmx:100806633 1586.62