Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi182g00112 ATGTCCCCTGCATATGCAACTCTGATCACTTCTCTCTCTTGTTCATCCCCAATGAAACAAACCGATACGTTAATCTCAACCATATTTCAATGGCTGAGATTCATTTTCTTCTCTCCTTGTCCTCAGAGAGCTCTTTTGTCTGCGGTTGATGTCCTACTCCTTCTCATCCTCTTCATCTTTGCTGTCATCAAGCTCTATAAAAGGTTCACCTCCAATGGCGATTCCCCCAATGAACTCAACAAGACCCTCATAAGCAAAAACAGATACTCTGTCATAACAACTACATGGTTTAAGCTAACTCTAACTGTAACCATTGTTTTGGCCATACTGTACACGGTTGCTTGCGTTCTTGTATTCACCAGTTCAGCCAAGCTTCAATGGAACCAAGTTGATGGGGTGTTTTGGTTAGTCCAGGCCATAACTCATGTAGCACTTGCAATCTTAATCATACATGAGAAAAAATTTGAAGCTGTTACACACCCAATGTTGCTTAGAGTTTATTGGGTTGTGAATTTCATTATCATTTCCTTGTTCACAGCATCTGGGGTTGTACGTTTGGTTTCTGTGGATGTGGATGAAACCAAAGACTTCATCTTTAAGGTGGATGACGTGGTTTCTTTCATTTCACTCCCTCTGTCGCTATTTCTTCTTTGTGTATCGGTTAAAGGAGCCACTGGGGTTATACCGACAGAACAAACACAACCACTTATTGACGACGAAACGAAGCTACATCTGAGAAACTCTGAGGTTACTTCCTTTGCTTCAGCTTCTATAGTTTCCAAGGCATTTTGGATTTGGATTAACCCGTTACTGAGTAAAGGGTACAAATCACCATTGAAAATTGATGAGATTCCAACACTTTCTCCTGAGCATAGAGCAGAGAAGATGTCAATTTTGTTTGAAGCAAAATGGCCTAAAACAAACGAGAGTAATAAGCACCCAGTTAGAATCACCTTGATTCGGTGCTTCTGGAAGGAGTTAGCATTCACTGCATTCCTTGCCATTGTTAGGCTTTGTGTGATGTTTGTAGGGCCGGTTCTCATACAAAGTTTTGTTGATTTCACATCAGGGAAGAGAAGCTCTGTGTATGAAGGATATTACCTTGTGTTGATTCTTCTCATTGCTAAATTCATAGAAAGCATGACCACTCACCATTTCAACTTCAATGCTCAGAAGCTTGGGATGCTTATCAGGTGCACACTTACCCCTTCTTTGTATAAGAAAGGGTTAAAGCTTTCCTTCTCTGCTAGGCAGGATCATGGTGTAGGGACCATTGTGAATTACATGGCGGTTGATACACAACAACTCTCTGATATGATGCTTCAGTTACATTCTATATGGATGATGCCACTTCAAGTTGGAATTGGCTTATTTCTGCTTTACAATTGTCTTGGTGCATCAGCAGTTACTGCATTGCTTGGACTTATTGGTATTATTGTGTATTCTGTGATTGGTACCCGTAGAAACAACAGGTTCCAATTTAATGTGATGCTGAACCGTGACTCAAGAATGAAAGCTGTGAATGAGATGCTTAATTACATGCGTGTGATCAAGTTTCAGGCTTGGGAAGAACATTTCAATGGGAGAATTATGGGTTTCCGTGGGTCAGAATATGCTTGGCTTTCTAAGTTGATGTTCTCAATCTGTGGCAATATTATTGTGATGTGGAGCACACCTTTATTGATAGCAACTCTAACTTTTGCTACGGCTATTTTGCTTGGAGTTCAGCTTGATGCAGCCACAGTCTTCACCACAACAACTGTGTTCAAGATCTTGCAGGAACCTATTAGGACATTCCCACAGTCTATGATATCTCTTTCTCAAGCAATGATATCACTGGAGAGGTTAGATAGGTTCATGTTGAGCTCAGAATTGTCTAATGATTCAGTTGAGAGAGAAGAAGGGTGTGGTGGAGAAACAGCAATGGAAGTTAAAGATGGGAACTTTAGTTGGGATGATGATAGCCTGCATCATCAGGACTTGAAAAATGTTAATTTGGAGATCAAAAAGGGAGGGCTTACAGCAATTGTTGGGACTGTTGGGTCAGGAAAGTCATCTCTCCTTGCATCAATTCTTGGTGAGATGTGCAAAATTTCTGGAAAGGTTCGGGTTTGTGGGAGTATTGCTTATGTTGCACAAACATGTTGGATTCAAAATGGGACAATTGAAGAAAACATTCTCTTTGGTTTACCAATGGACAGAAATAAGTACAATGATGTCATCAAGGTGTGTTGCTTGGAGAAAGATTTGGAAATGATGGATTTTGGGGATCAGACAGAGATTGGAGAACGTGGAATCAACCTAAGTGGAGGCCAGAAGCAGCGTATACAACTTGCCAGGGCTGTATATCAAGACCGTGATATATATCTTCTTGATGATGTCTTCAGTGCTGTTGATGCTCACACTGGCTCTGAAATATTTAAGGTGGATTGCGTGAAGGGAGCTCTAAAAGGCAAGACCGTTATTCTTGTAACACACCAAGTAGATTTCCTACATAATGTGGATCTTATATTAGTGATGAGGGATGGTATGATAGTCCAATCAGGGAAATACAATGATCTACTAGATTCTGGAATGGATTTTAAAGCTTTGGTAGATGCACATGAGACCTCAATGGAACTAGTAGAGCAGGGTGCGGGTGAAAATTTGAACAAACCAATGAAATCTTCAGAGGCAGATTCTATTTACAAAGGAACCAATGGTGAAAGCAATTCTGTTGAACAGCCAGAGTCTGCCAAGAAAAGTTCTAAACTTATCAAAGAAGAAGAGAGAGAAACTGGCAAAGTGAGCTTACATATCTATAAACTCTACTGCACTGAGGCTTTTGGGTGGTGGGGAATTACAGGAGTAGTGCTTCTTTCTTTGTTATGGCAAGGGACTTTGATGGCAATTATTGTGGTAGTGATAAGATCCTACTCCTTTACATTCATGGGACTAAAGACAGCACAACTTTTCTTCACACAAATTCTTAATAGCATCTTGCATGCGCCAATGTCTTTCTTTGATACTACACCATCTGGGAGAATTCTAAGCAGGGCATCCACTGATCAAACCAATGTTGATATCCTTCTCCCTTTGTTCATGGGAGTTGTTATTGCCATGTACATCACAGTGCTCAGCATCTTAATCGTCATCTGTCAAAATTCTTGGCCAACAGTGTTCTTGATAATTCCTCTTATTTGGTTAAATATATGGTACCGGGGTTACTATCTTGCTTCATCTCGTGAATTAACTCGCCTGGATTCAATTACCAAAGCACCTTTGATTCATCACTTCTCTGAAAGCATTGCAGGGGTCATGACAATACGTGCATTTAGAAAGCAAAAGAAATTTTGTGAAGAAAATCTCAAACGGGTGAATGCTAATTTGAGAATGGATTTCCACAACTATAGTTCCAATGAGTGGTTGGGACTACGCTTAGAATTGCTTGGAAGCTTTGTCTTTTGCATCTCTGCTATGTTCATGATCATCCTACCTAGCAGTATCATAAAGCCAGAAAATGTTGGTTTATCTCTCTCTTATGGTTTGTCCTTAAATTCGGTGTTGTTCTGGTGTGTATACATGAGCTGTTTTGTTGAAAACAAAATGGTATCTGTTGAGAGGATAAAACAGTTCACAAATATTCCATCGGAATCAGCATGGAATATGAAGGATTATTTGCCTCCTTCAAATTGGCCAGGTCAAGGCAATGTAGATATCAAAGACTTGGAGGTGAGATATCGTCCAAGCACTCCTTTGGTTCTTAAAGGCATTACTTTAAGCATTAGTGGAGGAGAGAAGATTGGTGTTGTTGGTCGAACTGGAAGTGGAAAATCAACTTTGATTCAAGTTTTCTTTAGGCTGGTGGAACCTTCAAGAGGGAAAATAATAATTGATGGTATTGACATATCTGTTTTGGGGCTTCATGATCTTAGATCTCGGTTTGGTATCATTCCTCAGGAGCCTGTCCTTTTTGAAGGAACTGTTAGAAGCAACATTGATCCAATTGGACAGTACACAGATGAAGAGATATGGCAGAGTTTGGAACGCTGTCAGCTAAAAGAAGTGGTGGCTGCTAAGCCTGAAAAGCTTGACTCTTTAGTGGTGGATAATGGAGAGAACTGGAGTGTGGGGCAGAGACAGTTGCTTTGTTTAGGGCGGGTTATGCTTAAGAGAAGCAGGCTCTTGTTTATGGATGAGGCAACTGCTTCTGTTGATTCTCAAACTGATGGTGTAATTCAAAGGATCATTAGAGAAGACTTTGCAGCTTGTACCATCATCAGCATTGCTCACAGAATCCCCACAGTCATGGACTGTGATAGAGTTTTGGTTGTAGATGCAGGGAGAGTGAAAGAATTTGATAAGCCTTCCAACTTGCTTCAGAGGCAATCTCTATTTGGGGCATTAGTTCAAGAGTATGCCAATCGCTCCACAGGACTATAA 4422 0.4055 MSPAYATLITSLSCSSPMKQTDTLISTIFQWLRFIFFSPCPQRALLSAVDVLLLLILFIFAVIKLYKRFTSNGDSPNELNKTLISKNRYSVITTTWFKLTLTVTIVLAILYTVACVLVFTSSAKLQWNQVDGVFWLVQAITHVALAILIIHEKKFEAVTHPMLLRVYWVVNFIIISLFTASGVVRLVSVDVDETKDFIFKVDDVVSFISLPLSLFLLCVSVKGATGVIPTEQTQPLIDDETKLHLRNSEVTSFASASIVSKAFWIWINPLLSKGYKSPLKIDEIPTLSPEHRAEKMSILFEAKWPKTNESNKHPVRITLIRCFWKELAFTAFLAIVRLCVMFVGPVLIQSFVDFTSGKRSSVYEGYYLVLILLIAKFIESMTTHHFNFNAQKLGMLIRCTLTPSLYKKGLKLSFSARQDHGVGTIVNYMAVDTQQLSDMMLQLHSIWMMPLQVGIGLFLLYNCLGASAVTALLGLIGIIVYSVIGTRRNNRFQFNVMLNRDSRMKAVNEMLNYMRVIKFQAWEEHFNGRIMGFRGSEYAWLSKLMFSICGNIIVMWSTPLLIATLTFATAILLGVQLDAATVFTTTTVFKILQEPIRTFPQSMISLSQAMISLERLDRFMLSSELSNDSVEREEGCGGETAMEVKDGNFSWDDDSLHHQDLKNVNLEIKKGGLTAIVGTVGSGKSSLLASILGEMCKISGKVRVCGSIAYVAQTCWIQNGTIEENILFGLPMDRNKYNDVIKVCCLEKDLEMMDFGDQTEIGERGINLSGGQKQRIQLARAVYQDRDIYLLDDVFSAVDAHTGSEIFKVDCVKGALKGKTVILVTHQVDFLHNVDLILVMRDGMIVQSGKYNDLLDSGMDFKALVDAHETSMELVEQGAGENLNKPMKSSEADSIYKGTNGESNSVEQPESAKKSSKLIKEEERETGKVSLHIYKLYCTEAFGWWGITGVVLLSLLWQGTLMAIIVVVIRSYSFTFMGLKTAQLFFTQILNSILHAPMSFFDTTPSGRILSRASTDQTNVDILLPLFMGVVIAMYITVLSILIVICQNSWPTVFLIIPLIWLNIWYRGYYLASSRELTRLDSITKAPLIHHFSESIAGVMTIRAFRKQKKFCEENLKRVNANLRMDFHNYSSNEWLGLRLELLGSFVFCISAMFMIILPSSIIKPENVGLSLSYGLSLNSVLFWCVYMSCFVENKMVSVERIKQFTNIPSESAWNMKDYLPPSNWPGQGNVDIKDLEVRYRPSTPLVLKGITLSISGGEKIGVVGRTGSGKSTLIQVFFRLVEPSRGKIIIDGIDISVLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYTDEEIWQSLERCQLKEVVAAKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFMDEATASVDSQTDGVIQRIIREDFAACTIISIAHRIPTVMDCDRVLVVDAGRVKEFDKPSNLLQRQSLFGALVQEYANRSTGL 1473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi182g00112 1473 CDD ABC_6TM_ABCC_D1 329 616 IPR044746 GO:0140359
Sebi182g00112 1473 Pfam ABC transporter transmembrane region 329 595 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi182g00112 1473 Pfam ABC transporter transmembrane region 960 1167 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi182g00112 1473 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 642 867 IPR003439 GO:0005524
Sebi182g00112 1473 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 254 1466 - -
Sebi182g00112 1473 Pfam ABC transporter 661 794 IPR003439 GO:0005524
Sebi182g00112 1473 Coils Coil 1102 1122 - -
Sebi182g00112 1473 SMART AAA_5 1257 1441 IPR003593 GO:0016887
Sebi182g00112 1473 SMART AAA_5 670 852 IPR003593 GO:0016887
Sebi182g00112 1473 CDD ABCC_MRP_domain1 642 843 - -
Sebi182g00112 1473 FunFam ABC transporter C family member 10 311 624 - -
Sebi182g00112 1473 SUPERFAMILY ABC transporter transmembrane region 318 620 IPR036640 GO:0005524|GO:0016020
Sebi182g00112 1473 Pfam ABC transporter 1248 1396 IPR003439 GO:0005524
Sebi182g00112 1473 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 960 1194 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi182g00112 1473 CDD ABC_6TM_ABCC_D2 959 1206 IPR044726 GO:0140359
Sebi182g00112 1473 Gene3D - 1214 1464 IPR027417 -
Sebi182g00112 1473 ProSitePatterns ABC transporters family signature. 768 782 IPR017871 GO:0005524|GO:0016887
Sebi182g00112 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1224 1464 IPR027417 -
Sebi182g00112 1473 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1233 1465 IPR003439 GO:0005524
Sebi182g00112 1473 FunFam ABC transporter C family member 3 1214 1465 - -
Sebi182g00112 1473 FunFam ABC transporter C family member 5 960 1212 - -
Sebi182g00112 1473 CDD ABCC_MRP_domain2 1229 1449 - -
Sebi182g00112 1473 MobiDBLite consensus disorder prediction 883 912 - -
Sebi182g00112 1473 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 328 608 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi182g00112 1473 Gene3D - 618 890 IPR027417 -
Sebi182g00112 1473 MobiDBLite consensus disorder prediction 879 919 - -
Sebi182g00112 1473 Gene3D ABC transporter type 1, transmembrane domain 317 617 IPR036640 GO:0005524|GO:0016020
Sebi182g00112 1473 SUPERFAMILY ABC transporter transmembrane region 950 1211 IPR036640 GO:0005524|GO:0016020
Sebi182g00112 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 641 866 IPR027417 -
Sebi182g00112 1473 Gene3D ABC transporter type 1, transmembrane domain 910 1212 IPR036640 GO:0005524|GO:0016020
Sebi182g00112 1473 FunFam ABC transporter C family member 4 625 885 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi182g00112 Sebi-Chr182 1216202 1222146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi182g00112 598 860 Calmodulin-binding Proteins AT2G36910 31.786 8.90e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi182g00112 - K05666 gmx:100808752 2350.86