Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi182g00092 ATGTCAGGTAAAACTCGCGCGATCTACGAGTCTGTGAGTCGGAGAAAGCTACTTCAGGCTACAGTTGGTGATGAGGTTGTAGTGAGAGACATCGTGACGGTGAGCCAAGATGGAACTGGAAACTTCACCACTATCAATGACGCCATTGCCGCAGCTCCAAACAAATCTGCCTCCACCGACGGTTACTTCCTCATCTATGTCACCGCCGGTGTATACGAAGAATACGTCTCCATTGATAAGAAAAAAACTTACCTCATGCTCGTCGGAGATGGATTTGTGGGTGTGAACATGACAATCCGTAACACCGCGGGGGCTGTGAAGCACCAAGCAGTGGCAGTTAGAAATGGAGCTGATTTGTCCACGTTTTACAGTTGCAGCTTTGAGGGGTACCAAGACACACTCTACACACATTCCCTGAGACAATTCTATAGGGAATGTGATATCTACGGAACTGTAGATTTCATATTCGGGAACGCTAAGGTTGTTTTCCAAAATTGCAACTTGTATCCTCGTCTCCCGATGAGTGGGCAATTCAACGCCATAACCGCACAAGGCCGAACCGACCCGAACCAAGACACGGGTACTTCGATCCATAACTGTACAATTAGAGCAGCGGATGATTTGGCTGCGAGCAATGGTGCGGCTGCAACGTATCTTGGAAGGCCATGGAAGGAGTATTCAAGGACGGTTTATATGCAAACTTTTATAGACAGTGTGGTGGATGGTGCTGGGTGGCGTGCATGGGATGGTGATTTTGCTTTGAGCACATTGTATTACGCTGAGTTCAATAACAATGGGCCAGGGTCTAGTACAGCTGGTAGAGTGACGTGGCCAGGGTACCATGTGATGAATGCCACGGATGCAGCTAACTTTACGGTGTCAAACTTCTTGCTTGGGGATGATTGGTTGCCACAGACAGGAGTGTCTTACACCAATACCTTGATATAG 948 0.48 MSGKTRAIYESVSRRKLLQATVGDEVVVRDIVTVSQDGTGNFTTINDAIAAAPNKSASTDGYFLIYVTAGVYEEYVSIDKKKTYLMLVGDGFVGVNMTIRNTAGAVKHQAVAVRNGADLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAKVVFQNCNLYPRLPMSGQFNAITAQGRTDPNQDTGTSIHNCTIRAADDLAASNGAAATYLGRPWKEYSRTVYMQTFIDSVVDGAGWRAWDGDFALSTLYYAEFNNNGPGSSTAGRVTWPGYHVMNATDAANFTVSNFLLGDDWLPQTGVSYTNTLI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi182g00092 315 ProSitePatterns Pectinesterase signature 2. 148 157 IPR033131 -
Sebi182g00092 315 Gene3D - 4 90 IPR012334 -
Sebi182g00092 315 PANTHER PECTINESTERASE 16 304 - -
Sebi182g00092 315 Gene3D - 91 314 IPR012334 -
Sebi182g00092 315 FunFam Pectinesterase 89 314 - -
Sebi182g00092 315 Pfam Pectinesterase 91 300 IPR000070 GO:0030599|GO:0042545
Sebi182g00092 315 SUPERFAMILY Pectin lyase-like 28 312 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi182g00092 Sebi-Chr182 1045209 1046993 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi182g00092 1 315 Carbohydrate Esterase AT4G02330 65.896 3.35e-165 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi182g00092 K01051 - gmx:100800971 566.614