Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi182g00077 ATGGCGGCAGAGGCCGCATTGTCCTTTTCTGTGGCATCGGTTGTGGAGGATGTGCTTCAACAACACGGCCCTCGCCTCAAAGATCTTGATTTGCAATCTAGGAAAGCTGAAGAAGCTGCATCAAGAAGGTATGAAGCAGCAGGGTGGCTTAGAAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTACCAGAAGAGCCCTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATTATCCTTTGTAATGTTATTAATAAGGTCCAATCTGGAGCTGTGCCTAAGGTTGTGGAGAGTCCTGTTGATTCTGCTCTGATCCCTGATGGGGCACCGTTATCCGCATATCAATATTTTGAAAACGTGAGGAATTTCTTGGTGGCTGTCCAAGAAATTGGACTTCCTACATTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCATCCAGGATTGTGAACTGCGTCTTGGCCCTTAAATCCTATAGTGAATGGAAACAGAATGGGGCAAATGGTGCCTGGAAATTTGGTGGAACTCTCAAACCTACTATCTCTGCAAAATCTTTTGTGAGAAAAAACTCAGAGCCATTTACTAACTCCTTGTCAAGGACTTCATCAATCAATGAAAAATCTCTGGCTACTCTTAACTCTGACGTTGAGTCTAATAAAATGGTAGATAAGAAGCCAGAAGAAATTCCAATGTTGGTTGAATCCGTTTTGAACAAGGTTGTAGAGGAGTTTGAGCATCGTATTGCAAGCCAAGACAAAATAACTTCAAGAGATTCTGTTCCTGAAAGCAACGGATCTGTATCAAAGTTTGTTATGGCAGATAAAAAGGTGGATAACAAAACTCATATGGTAACAAAGAAAGAGGATTACATTCAAAAAAACCGTGTTGCTGCTGAGGAATTGCAAAGCCACCTTCTGAAGCAGCAGACACTCTTTGATCAACAACAAAGAGATGTTCAAGAGCTAAAGCTTACTCTTCACACCACAAAATCTGGTATGCAGTTAATGCAAAAGAAATTGCAGGAGGAGTTTTCCAATCTTGGCATGCACATTCATGGCTTAGCTCATGCTGCTTCTGGATATCATAGAGTTCTTGAAGAAAATCGCAAACTATACAATGAAGTACAGGATCTTAAGGGAAGTATTAGGGTGTATTGTCGAGTAAGACCCTTCTTTCCTGGACAAGCAAACCAATTGAGCACAGTAGAAAATATAGAAGATGGAACTATCACAATTAATGTTCCTTCAAAGAATGGGAAGGGACGCAGATCCTTCAACTTCAACAAAGTCTTTGGACCATCTGCAACCCAAGCGGAGGTCTTCTTTGATATGCAGCCACTTATTAGGTCTGTTCTTGATGGTTATAATGTTTGCATATTTGCATATGGCCAAACAGGATCAGGAAAAACTCACACCATGACTGGACCTAAAGAGATCACAGAGAAAAGCCAAGGAAGTGAGAGAGTGGATAAATCTGAGGCCACAGGAGATAGACTGAAAGAGGCACAACATATTAACAAATCTCTTTCAGCTTTGGGTGATGTCATTGCTTCCCTTGCTCAGAAAAACTCACACGTTCCTTATAGAAATAGTAAACTCACACAATTACTCCAAGATTCACTTGGAGGACAGGCTAAGACACTAATGTTTGTTCACATAAGTCCAGAGACTGATGCTATTGGAGAAACAATTAGCACCTTAAAATTTGCAGAAAGAGTTGCTACAGTTGAACTTGGTGCTGCCCGAGTAAACAAAGATAGTGCAGATGTTAAGGAGCTCAAAGAAACAGGCCGCACTGGCAAGAAAGAAGGGGAATCAGAACATTCTTTATCTAGCAGCTCTGACAAATACAGAACAAAGGCTAGCAACCTATCACCTTATCATATAAACCAGCAGGTTGCAGACACTAGAGATCCACTTGGATGCCGGCGACCAATGGTTGAAGTTGGCAACATAGATCTTCAGAGTAATACAACATTGAGGCACAAAACTCAGAGCTTTGATTTTGATGAGATATCAGCAAATTCACCACCATGGCCCCCAGTGAATAATGTTGGACAAAACTATGGGGAGGATGACAAAGAAACAGGTTCTGGAGAATGGGTTGATAAAGTAATGGTAAACAAAACTGAGAACCTCTTGGGGTGTTGGCAAGCAAGCAATGGGAACTTATCAGAGGCTTTTATCAGAAATATCTCCAAGATTCTTCCAAAATGTACTCAGAACAGTTTAACATTGCGGGTTCAGATGACATGGATGAGCTTGATGCTGCAACCAGTGATTCCTCCGAACCTGACTTGCTTTGGCAATTTAATCATTCCAAACTCACCAATGGAATGGGATCAAGACTATGAAACCTGTCTCAAAGGCAGCAAAAAGCCAGATTTGAGGGAGGAATGCTGTTCATTCTCCTCTTGGTCCTTCACCTTCGTTGAAGCAACAATCAAATGGTGTCTCACACGAACAGGAAGGCATCCAGCTTCGGTTGATGTGAAACGTAAAACTGGGAGCAGAAAATAA 2523 0.4166 MAAEAALSFSVASVVEDVLQQHGPRLKDLDLQSRKAEEAASRRYEAAGWLRKMVGVVAAKDLPEEPSEEEFRLGLRSGIILCNVINKVQSGAVPKVVESPVDSALIPDGAPLSAYQYFENVRNFLVAVQEIGLPTFEASDLEQGGKSSRIVNCVLALKSYSEWKQNGANGAWKFGGTLKPTISAKSFVRKNSEPFTNSLSRTSSINEKSLATLNSDVESNKMVDKKPEEIPMLVESVLNKVVEEFEHRIASQDKITSRDSVPESNGSVSKFVMADKKVDNKTHMVTKKEDYIQKNRVAAEELQSHLLKQQTLFDQQQRDVQELKLTLHTTKSGMQLMQKKLQEEFSNLGMHIHGLAHAASGYHRVLEENRKLYNEVQDLKGSIRVYCRVRPFFPGQANQLSTVENIEDGTITINVPSKNGKGRRSFNFNKVFGPSATQAEVFFDMQPLIRSVLDGYNVCIFAYGQTGSGKTHTMTGPKEITEKSQGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPETDAIGETISTLKFAERVATVELGAARVNKDSADVKELKETGRTGKKEGESEHSLSSSSDKYRTKASNLSPYHINQQVADTRDPLGCRRPMVEVGNIDLQSNTTLRHKTQSFDFDEISANSPPWPPVNNVGQNYGEDDKETGSGEWVDKVMVNKTENLLGCWQASNGNLSEAFIRNISKILPKCTQNSLTLRVQMTWMSLMLQPVIPPNLTCFGNLIIPNSPMEWDQDYETCLKGSKKPDLREECCSFSSWSFTFVEATIKWCLTRTGRHPASVDVKRKTGSRK 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi182g00077 840 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 486 IPR027640 GO:0003777|GO:0007018
Sebi182g00077 840 Pfam Kinesin motor domain 486 576 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi182g00077 840 MobiDBLite consensus disorder prediction 471 497 - -
Sebi182g00077 840 MobiDBLite consensus disorder prediction 482 497 - -
Sebi182g00077 840 ProSiteProfiles Kinesin motor domain profile. 486 577 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi182g00077 840 MobiDBLite consensus disorder prediction 593 615 - -
Sebi182g00077 840 SUPERFAMILY Calponin-homology domain, CH-domain 38 172 IPR036872 -
Sebi182g00077 840 Gene3D Kinesin motor domain 485 618 IPR036961 -
Sebi182g00077 840 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 515 596 - -
Sebi182g00077 840 ProSiteProfiles Kinesin motor domain profile. 382 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi182g00077 840 Gene3D Kinesin motor domain 324 484 IPR036961 -
Sebi182g00077 840 SMART ch_5 42 160 IPR001715 GO:0005515
Sebi182g00077 840 MobiDBLite consensus disorder prediction 616 633 - -
Sebi182g00077 840 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Sebi182g00077 840 CDD CH_AtKIN14-like 42 159 - -
Sebi182g00077 840 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Sebi182g00077 840 MobiDBLite consensus disorder prediction 593 633 - -
Sebi182g00077 840 SMART kinesin_4 380 585 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi182g00077 840 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 362 577 IPR027417 -
Sebi182g00077 840 Pfam Microtubule binding 368 481 IPR031852 GO:0008017
Sebi182g00077 840 Gene3D - 27 186 IPR036872 -
Sebi182g00077 840 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi182g00077 Sebi-Chr182 899443 905961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi182g00077 486 577 Calmodulin-binding Proteins AT5G65930 61.957 8.37e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi182g00077 K10406 - cpap:110808121 813.142