Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi182g00072 ATGGCGACGAGAAATCGAACTCTACAGTTCAGGAAGCACAGGGACGCTGTGAAGAGCGTACGTGCTCCTCTCTCTTCATCAGCATCTGCTTCCGGTGGTCCTGTCATTGAAATGGTGAACACTTCGCTTCTTCGTTCCAATAATCGATCTTCCTACACCCCTCTAAGCACCCACGATCCAGGTCCAGCCACCTCAAGTGATGCATTTACTGTGGGCTTGCCGCCATCTTGGGTTGATGATTCGGAAGAAATAGCTACAAACATACAACGTGCTAAGATTAAAATGTCTGAGTTAACCAAAGCTCATGCAAAGGCTTTAATGCCCTCCTTTGGTGATGGCAAAGATGATCAGCGTCAGATTGAGACTCTCACCCGGGAAATTACGGATCTCCTCAGAAAGTCTGAAATGAGGCTGAAAAGACTTTCTGCTGCCATGGGATCTTCTGAGGATTCTAATGTTAGAAAAAATGTGCAGTTGGCTTTTGTTGTTCTTTTAGATTCACTCTACTGCTTTTCTGCCATTTCTTTTGAAAACAGTTCCTTGCGTTCGCTTGCTACAGACCTTCAGAACCTGTCATTAGACCTCCGGCGAAAGCAGTCAGCATATTTGAAACATTTGCAGCAGCAAAAAGAGGGTTATGATGGAATTGACTTGGAGATGAACTTTAATGGGAGTAAATCTGGACTGCAGGATGATGGATTCAGTGATGTGGGCTTTAGTGGAGAGCAAATGACAAAGCTAAAGAAAAGTGAGCAGCTCTCAGAGGAAAGGGAAAGAGAGATTGAACAGGTTGTTAAATCAGTCAACGAACTTGCTCAGATCATGAAGGATCTCTCTGTTCTTGTGATAGATCAGGGAACAATTGTTGATAGAATTGACTACAACATTCAGAATGTTGCTACTTCCGTAGAAGAGGGTTTAAAGCAGTTGCAAAAGGCAGAGAGAACACAGAAAAAAGGTGGGATGATCATGTGTGCAACAGTGCTTGTTATAATGTGCTTTGTCATGATAGTTCTATTGATACTCAAGGAGATACTCTTTTAG 1044 0.431 MATRNRTLQFRKHRDAVKSVRAPLSSSASASGGPVIEMVNTSLLRSNNRSSYTPLSTHDPGPATSSDAFTVGLPPSWVDDSEEIATNIQRAKIKMSELTKAHAKALMPSFGDGKDDQRQIETLTREITDLLRKSEMRLKRLSAAMGSSEDSNVRKNVQLAFVVLLDSLYCFSAISFENSSLRSLATDLQNLSLDLRRKQSAYLKHLQQQKEGYDGIDLEMNFNGSKSGLQDDGFSDVGFSGEQMTKLKKSEQLSEEREREIEQVVKSVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATSVEEGLKQLQKAERTQKKGGMIMCATVLVIMCFVMIVLLILKEILF 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi182g00072 347 MobiDBLite consensus disorder prediction 49 64 - -
Sebi182g00072 347 MobiDBLite consensus disorder prediction 49 70 - -
Sebi182g00072 347 Gene3D - 74 305 - -
Sebi182g00072 347 SUPERFAMILY t-snare proteins 73 306 IPR010989 GO:0016020|GO:0016192
Sebi182g00072 347 CDD SNARE_syntaxin16 255 312 - -
Sebi182g00072 347 ProSitePatterns Syntaxin / epimorphin family signature. 257 296 IPR006012 GO:0005484|GO:0006886|GO:0016020
Sebi182g00072 347 PANTHER SYNTAXIN 79 333 IPR045242 -
Sebi182g00072 347 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 251 313 IPR000727 -
Sebi182g00072 347 SMART tSNARE_6 246 313 IPR000727 -
Sebi182g00072 347 Pfam SNARE domain 287 339 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi182g00072 Sebi-Chr182 861497 866598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi182g00072 1 347 SNARE and Associated Proteins AT4G02195 64.470 3.15e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi182g00072 K08489 - gmx:100803629 489.96