Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi182g00063 ATGGGAAGGGCTCCTTGTTGTGAGAAAGTGGGATTGAAGAAAGGGAGGTGGACAACAGAGGAAGATGAAATATTGACAAACTACATTCAGGCCAATGGGGAAGGTTCTTGGAGGTCATTGCCAAAAAATGCAGGATTGCTGAGATGTGGGAAGAGCTGCAGATTAAGATGGATTAACTATTTAAGAGCTGATCTCAAAAGGGGAAATATTTCTGTTGAAGAGGAGAATATCATTGTAAAGTTGCATGCTTCTTTTGGCAACAGGTGGTCTTTGATTGCAAGTCACTTGCCTGGCAGAACAGACAACGAGATAAAAAATCACTGGAACTCACACTTGAGTAGGAAAGTCTACCGCTTCAAAGGATCATCATCAGAAGAAATCATCGTAGATACCCCTCCTAAGCGCAAAGGTAGAACCAGCCGCTGGGCCATGAAGAAGAACAGCAAAAACTACGCCAAAAAGGCTTCTTCTGATCCCACTCCCCAAATTAATAACGTGGAACCTGTTCCTGTTCCTGTTCCACCCACCACCCCTGCACTAGAGAGCGAGAACAACTTGTCTAGTTCTTTCTTGGTAGAGGGAGAAGATCAAAACGGAGGAGGAGGTACTATGTTGACCTGTGACGACGATGGGTTATTGCAGTGTTTTGACGGTGACGTGTCAGCTGGAGCGTGTCAGGAGGTTATTAATGGAGATGACTTGTTCAATTTTGATGAATTCATGGACACATGCTTAGTGGAAGCAAGCGAGATTTTGAGCACCTTTTGCGAAAGCAATGATGTACTAGTAATAAATGATAAAGGGGACACGTGTCATGCAACAAATAATGTGGACCCGGAGAACCACAGCTCGAATATTGAGGAGTTACAAAGTTGTTATTCTTGCTCTTCTAATTCCATGCCATGGCCTTGGGACTTCGATGATGATGATAGCAGCTGGGATTGGGAGAGCGTGTTGCAGTTGAATCAGTTAGAGTACTCATCGGAGCAACATCAAAAACTCCTCAATTGGCTGTGGGAAGATGATGATTGGGAAAACGAGTTTAAGATATTTGGAGAGATTGACCTAATTGAGACACGAAGTCAAAATGAAACTATATGA 1101 0.4342 MGRAPCCEKVGLKKGRWTTEEDEILTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNISVEEENIIVKLHASFGNRWSLIASHLPGRTDNEIKNHWNSHLSRKVYRFKGSSSEEIIVDTPPKRKGRTSRWAMKKNSKNYAKKASSDPTPQINNVEPVPVPVPPTTPALESENNLSSSFLVEGEDQNGGGGTMLTCDDDGLLQCFDGDVSAGACQEVINGDDLFNFDEFMDTCLVEASEILSTFCESNDVLVINDKGDTCHATNNVDPENHSSNIEELQSCYSCSSNSMPWPWDFDDDDSSWDWESVLQLNQLEYSSEQHQKLLNWLWEDDDWENEFKIFGEIDLIETRSQNETI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi182g00063 366 MobiDBLite consensus disorder prediction 148 168 - -
Sebi182g00063 366 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sebi182g00063 366 FunFam Myb transcription factor 11 67 - -
Sebi182g00063 366 CDD SANT 16 61 IPR001005 -
Sebi182g00063 366 Gene3D - 71 116 - -
Sebi182g00063 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Sebi182g00063 366 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Sebi182g00063 366 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sebi182g00063 366 Gene3D - 11 67 - -
Sebi182g00063 366 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 176 - -
Sebi182g00063 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Sebi182g00063 366 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Sebi182g00063 366 CDD SANT 71 112 IPR001005 -
Sebi182g00063 366 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Sebi182g00063 366 SMART sant 13 63 IPR001005 -
Sebi182g00063 366 SMART sant 66 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi182g00063 Sebi-Chr182 746969 749058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi182g00063 1 145 MYB Transcription Factor Family AT2G47460 70.440 9.06e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi182g00063 Myb_DNA-binding 3.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi182g00063 K09422 - gmx:100817316 308.531