Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi182g00047 ATGCTAGAAGAGCAATCTGTCATAGGGAAACGACAAATATACTATGACAAACATGGTGGTGAGACACTGGTGTGTAGTGATAGTGAGGAGGAATCAACAGAAGCTGACGAAGTCAAACATGACTTTAATGATGTTGAAGATCAAATTTTATGGATGGCATTTGAGGAACATGGGTTCACTGAGGAGGTGTTGGATATTGTTTCGAAGCTTGTCAGAGGTACCGTTTCAGAAATCCAGCAAATCTTTGATTGTCCTCTACATGGTTGCTCACAACCTATATGTCCTAGTGAAAAGCAGAAAGTTTGGTTTGAACCAGAAGGTGACAGGAAACCATGCGGTGATCATTGTTACCTTAAGTTAAAGGATGTCAAGTTTTTGTCAGAAAAATATCCTTCAAAGTCTTCTCAAGATAGAAAAAAGAAAACAATGGAAGAGGTGGATGGGATATTGGCATGGTCCAATGCAAAAGAGCCTTGTAATCAAAGTTATAATGCTATCAAGGAGAAAGAAAGATGTGATTATGTGACAACCCCTTTTATAAAAGAAGTTGGATGTCATGAAGATCTAAATTCAAATTCAAATATGCTTGTATCAGTATCAAAATCTATGGGAAAACATAAGGACATGCATATATCAAACTTAACATTATGTGACTCAACTTCGCCTCCTGATGAGTCTCAGAGTTCTTGTAAGAAGTTGAAGAGAATCCAAAATGATATAGTTACGACAATTGGTGATGATAACAGGGACCTTAATTTGGATTCTTGTGATGATGAAAACCACACAATTACTTATGCAACTTTGAAAAATCTTATTGAACACACTTCAAATAAATTGACAATTTCGGATAGCACATGCCATGGTGTGTGTGAAAAAAGTGCTGGAGATGGACAAAAAGATATCACTAATGAGATAGAAATTGAGCACTCGTCTGATTCAATGGAAGTGCAAGTTGAAGAGATGCTAAGTTTCTCAGATTGGAAACCTCTGGAGAAAGAACTATATTTGAAAGGAGTAGAAATATTTGGGAGAAATAGCTGCCTTATAGCACGAAACTTACTTCCTGGCTTGAAGACCTGCATGGAAGTAGCTAGCTACATGTATGTTGGAGAAGTGTCAGTGCCCGACAGATCAATACTAAGTTCAATCATGGACAAAAATGGACAAGTTAATGCAAATTGCACAGACCGAGAGATGGCATCAAGGTCACGGTTGCTGCGAAAAAGACGTAAAGCTAGAAAGTTTAAATATTCTTCCAAGGAATGTGTGGAAAGCAATGTCCTTGTCTTCAAAATGGATCATGCTGTGAAAAATATTGTGGAAATCGGTTTAGAGGATGTCTTTGTGCTAAGAGTCAATGCAAAAGTCGACAATGTCCATGCTTTGCAGCTGAAAGGGAGTGTGACCCAGATGTCTGTCGAAATTGCTGGTTGTGGCGGTGGTTCATTAGGAGAGCCACCTCGACGTGGAGATGGTCAATGTGGAAATATGAGGATTCTTTTAAGGCAAAAACAGAGGATTCTTTTGGGAAAGTCTGATGTTGCAGGATGGGGAGCCTTCTTAAAGGAACCAGCTAACAAAAATGATTACCTTGGAGAGTACACGGGTGAATTGATCTCTCATTTAGAAGCTAATAAACGTGGGAAAATATATGATCGTGCAAACTCCTCTTTCCTTTTTAACTTGAATGATCAGGCAAGTGTTTCTTTAATGTACGTTGTTGATGCTTGTCGCAAAGGAGACAAGTTGAAATTTGCTAACCACTCGGTAAAACCCAATTGTTATGCAAGGATTATGCTTGTTGGTGGGGATCATCGAGTAGGCATATTTGCCAAGGAACGCATTGAAGCTGGTGAGGAGCTTTTCTATGATTATTGCTACGGTCCACAGGAAGCACCATCATGGTTTTAA 1911 0.3893 MLEEQSVIGKRQIYYDKHGGETLVCSDSEEESTEADEVKHDFNDVEDQILWMAFEEHGFTEEVLDIVSKLVRGTVSEIQQIFDCPLHGCSQPICPSEKQKVWFEPEGDRKPCGDHCYLKLKDVKFLSEKYPSKSSQDRKKKTMEEVDGILAWSNAKEPCNQSYNAIKEKERCDYVTTPFIKEVGCHEDLNSNSNMLVSVSKSMGKHKDMHISNLTLCDSTSPPDESQSSCKKLKRIQNDIVTTIGDDNRDLNLDSCDDENHTITYATLKNLIEHTSNKLTISDSTCHGVCEKSAGDGQKDITNEIEIEHSSDSMEVQVEEMLSFSDWKPLEKELYLKGVEIFGRNSCLIARNLLPGLKTCMEVASYMYVGEVSVPDRSILSSIMDKNGQVNANCTDREMASRSRLLRKRRKARKFKYSSKECVESNVLVFKMDHAVKNIVEIGLEDVFVLRVNAKVDNVHALQLKGSVTQMSVEIAGCGGGSLGEPPRRGDGQCGNMRILLRQKQRILLGKSDVAGWGAFLKEPANKNDYLGEYTGELISHLEANKRGKIYDRANSSFLFNLNDQASVSLMYVVDACRKGDKLKFANHSVKPNCYARIMLVGGDHRVGIFAKERIEAGEELFYDYCYGPQEAPSWF 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi182g00047 636 Gene3D SET domain 381 627 IPR046341 -
Sebi182g00047 636 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 1 80 IPR045318 GO:0006338|GO:0042054
Sebi182g00047 636 Pfam SET domain 516 625 IPR001214 GO:0005515
Sebi182g00047 636 CDD SET_EZH 505 627 - -
Sebi182g00047 636 ProSiteProfiles SET domain profile. 505 626 IPR001214 GO:0005515
Sebi182g00047 636 SMART set_7 505 632 IPR001214 GO:0005515
Sebi182g00047 636 CDD SANT 327 368 IPR001005 -
Sebi182g00047 636 SUPERFAMILY SET domain 491 628 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi182g00047 Sebi-Chr182 520150 524533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi182g00047 504 634 C2H2 Transcription Factor Family AT2G23740 29.577 8.44e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi182g00047 SET 3.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi182g00047 - - gmx:100808730 618.231