Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi182g00046 ATGGGTTTCAATTATTCTGCAAATTCAACTCCAAGAGAGGCTTTCTACCTCTTCACCCTCACACTCCTAAGCCTTCTCCTACCCCTTTCGTTTCTTCTTCTAGCAAGACTCTCTGTTGCTCAATACTATCTTCAAACCCTCACTTGGTACCATTCAACACAATCCTTTCCCTATGTTTTATCACTTGCCCTGCAAATCAACCCATGTATTCTCTATTTTCTTGTTTCTATTATCACCGCAGCTTCTCTAATCCACGGCTTGACGGGACAAATCACAACTTTGAGCGATTCATATTCATCAAGTATTGTTATTCAACCCCGACTCTACACTGCTTGGATTCTCCTTTGTACATTCCAAGTTTGTGTTGGTTTGGGCATTGAAGGAAGCATTTTGGGGGGATTTTATGACTCTGACTCTAGTTTTGGGGTTGAGAGGAGCCTCTTGAGCAGAGTGGTTTTCTTCTTGGGCTTGCACGAGACGACCCAAGTTTGGTGTGGGTTGGTGGTAAGGCCCGTGGTGGATGACACCGTGTTTGGGTTTGGTAGAAAAGAAAGATGGGTTGAGAGGGTGTGTTTGGCTGCGAGCTTAGGTACTTTATGGTGGTGGAGATTAAGGGAAGATGTGGAGACTTTGGTGGTTATGGCTGAGGCTAAGAAAGAACAATTGATGGAAGTGGGAATGGGTGATTTTGTTGGGTGGTGCCTCTATTATGTGACTGTCACAATTGGTATGGTAAGGGTTGTCAAGGGTCTTATGTGGATAGCTATGATTTTTCTGTGTAGAAGAAGGGAAACAGAGATTTCCACGGTGGAACCTAGGGAGAATGATGATAAGGCCGTCGCCATAGACTCATTCCATGCTCTAGGCTCCACTCCAGGAGGACATACACTAATTACAATTAGCTTTATGATAATCCACCAGATGGGTTATGGTTCTGTAGAAGAGGTTCTGTTCCATGAGAAAAACACTTTCTCTGGAATGGAATTGCTAAGAGAGACTAATCCTCTCCCTACTGAGAATGGAAAAGGAGCAATTATGTTAGAAGATCAAAATCAGCAACAAGAACTCCAAGTTAATAACTTGATGTTAGAAGAGATCAACTTTGGTCCTTATCTGCAACAAACACAACCTTTTCAGGAAACTACAGGGCTAAAGATTCACGGAATGGTAAATTCAGACCTTGTTGAACACAGTATGCAGGTGCCAACACCATCTTTAACATCTTTAGAACTCCTTAGAAATTATGGAAGCAGGTTGAAGAAGCTAAGTGGGCAAAACATAAACAACTCAAGCAACAATCTTGAAACCTCTCTGCATCACCAGAAGATGTCAACAGAAGAAATAATAAGAGTTGCTGGAGCAAGGTATGTTCAATATTCTGCTCATTGGAATGATAGTTTCTGCATCCCTATGCACCCTTATGGATTGGATCTTAGGGGTTTGTCTGAGGAAGAAAATAGAGACGTTGAACTTGCTCAGTTTCTCCTTGCTGCAGCTGAGAAAGTTGGTTGCAAACAATTTGAACGTGCAAGAAAGTTACTTCTCCGTTGTCAAAGGAATTCATCTCCCACTGGAAACACTGTTCAAAGGGTTGTCTTTCATTTTGCTCAAACACTTCGAGAGAGAATAGACAAAGAAACAGGAAGAGTGACACTAAAAGGATCAGAGAAAAATGAAGAAAGGGAATTGCTTCAAAAGATGGATACCAACAAGTCCCTTTTATGCCATAAAAAAATCCCTTTTAATCAAGTAATGCAATTCACTGGGATACAAACTATAGTGGAACATGTTGCATCTGAGACCAAAATTCATATGATAGATCTTGATATAAGAAGTGGGGTGCAGTGCACAGCTTTGATGCAAGCATTGGCTGAGCGCCAGAGTTGCAAGGTAGAGTTTTTGAAGGTAACTGCTATTGGATTTAATGCATGCAAGACCAATATAGAAGAGACAGGAAAAAGGTTAGTGAGTTTTGCTGAATCCTTGGACTTGCCCTTTTCATATAAGGCTGTTTTAGTCAGAGACATGGCTGAAATCAAGGAAGATCAATTTGAAATTGAAGAGGATGAAGCTGTGGCTGTGTACTCTCCTTATTTTCTAAGGACTATGATAGCAAGGCCTGATTGTATGGAAAAATTGATGTGGGTTATAAGAAATATTAGACCTTCTATAATGATAGTCCTTGAAATGGAAGCAAACCATAATTCACCCTCCTTTGTGAATCGCTTCATTGAAGCTTTGTTCTTTTACTCAGCTTTTTTTGATTGCCTTGAAACGTGCATAAAAGAGGATGATGAGTGCAGAATTATAACTGAAGCAATATTATCAGCAGGGATAAGAAACATTGTTGCTATGGAAGGCAGGGAAAGGACAGTTAGAAATGTGAAGATAGATGTTTGGAGAAGGTTCTTTGCAAGGTATAGAATGGTGGAAAGTGGATTTAGTGAGTCATCTTTGTATCAAGCTGAATTGGTTGCTAAAGAGTTTGCTTTTGGGAAATTCTGCACTATGGACAAGAATGGTAAGTGTCTATTAGTGGGATGGAAGGGGACTCCAATGCATTCTATCTCTGCTTGGAGGTTTCCTTGA 2589 0.4067 MGFNYSANSTPREAFYLFTLTLLSLLLPLSFLLLARLSVAQYYLQTLTWYHSTQSFPYVLSLALQINPCILYFLVSIITAASLIHGLTGQITTLSDSYSSSIVIQPRLYTAWILLCTFQVCVGLGIEGSILGGFYDSDSSFGVERSLLSRVVFFLGLHETTQVWCGLVVRPVVDDTVFGFGRKERWVERVCLAASLGTLWWWRLREDVETLVVMAEAKKEQLMEVGMGDFVGWCLYYVTVTIGMVRVVKGLMWIAMIFLCRRRETEISTVEPRENDDKAVAIDSFHALGSTPGGHTLITISFMIIHQMGYGSVEEVLFHEKNTFSGMELLRETNPLPTENGKGAIMLEDQNQQQELQVNNLMLEEINFGPYLQQTQPFQETTGLKIHGMVNSDLVEHSMQVPTPSLTSLELLRNYGSRLKKLSGQNINNSSNNLETSLHHQKMSTEEIIRVAGARYVQYSAHWNDSFCIPMHPYGLDLRGLSEEENRDVELAQFLLAAAEKVGCKQFERARKLLLRCQRNSSPTGNTVQRVVFHFAQTLRERIDKETGRVTLKGSEKNEERELLQKMDTNKSLLCHKKIPFNQVMQFTGIQTIVEHVASETKIHMIDLDIRSGVQCTALMQALAERQSCKVEFLKVTAIGFNACKTNIEETGKRLVSFAESLDLPFSYKAVLVRDMAEIKEDQFEIEEDEAVAVYSPYFLRTMIARPDCMEKLMWVIRNIRPSIMIVLEMEANHNSPSFVNRFIEALFFYSAFFDCLETCIKEDDECRIITEAILSAGIRNIVAMEGRERTVRNVKIDVWRRFFARYRMVESGFSESSLYQAELVAKEFAFGKFCTMDKNGKCLLVGWKGTPMHSISAWRFP 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi182g00046 862 Coils Coil 344 364 - -
Sebi182g00046 862 PANTHER TRANSMEMBRANE PROTEIN 8 277 - -
Sebi182g00046 862 Pfam GRAS domain family 492 860 IPR005202 -
Sebi182g00046 862 ProSiteProfiles GRAS family profile. 482 860 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi182g00046 Sebi-Chr182 506328 511011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi182g00046 489 861 GRAS Transcription Factor Family AT1G66350 31.016 2.84e-52 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi182g00046 GRAS 1.4e-83 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi182g00046 - - gmx:100791952 815.839