Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi182g00019 ATGGAAGAAACATTTGTACCCTTTGAGGGGATCAAGAATGACCTCAGAGGAAGGTTAATGTGCTACAAACAAGATTGGACAGGCGGAATCAGAGCAGGATTAAGGATTTTGGCCCCCACCACATACATATTCTTTGCTTCCGCAATACCTGTCATATCATTTGGTGAACAGCTAGAGAGAAATACTGATGGTGTTCTAACAGCTGTTCAAACCTTGGTATCCACTTCAATATGTGGCATCATACACTCAATCATTGGTGGTCAACCTTTATTGATTTTAGGAGTGGCAGAGCCTACAGTGATCATGTACACATTCATGTTCAATTTTGCAAAAGAGAGACCAGAGTTGGGAAGGGACCTGTTTCTGGCATGGACTGGATGGGTATGTGTATGGACTGCACTGTTGCTATTCTTATTGGCCATCTTAGGGGCTTGCTCCATCATCAACAGGTTTACCCGTATTGCAGGAGAATTGTTTGGCCTGCTTATTGCAATGCTTTTCATGCAGCAAGCTATCAAGGGACTTGTGGATGAATTTCGCATACCTGGGAGAGAAAATCCAAAAGCAGTTGAATTTACAACTCCATGGAGGTTTGCCAATGGGATGTTTGCTTTAGTCCTTTCATTTGGCCTTCTCCTCACTGCATTAAGAAGCAGAAAGGCTAGGTCATGGCGTTATGGTAGTGGTTGGATTCGCAGCCTCATAGCTGACTATGGTGTTCCCCTTATGGTCCTAGTTTGGACAGGTGTATCCTACATACCATCTGGAAATGTTCCACATGGTATCCCAAGGCGCCTTTTTAGCCCAAATCCATGGTCACCTGGTGCATATGAGAATTGGACAGTTATTAAGGATATGGTCCATGTTCCTATTGTCTACATAATTGGAGCATTTATCCCAGCAACCATGATTGCAGTGCTTTATTACTTTGACCACAGTGTGGCATCCCAGCTTTCCCAGCAGAAAGAGTTCAATTTGAGAAAGCCATCTTCTTACCACTATGACTTGCTCCTTTTGGGATTTTTGACCTTAATGTGTGGCCTTATTGGAATTCCTCCTTCAAATGGAGTCATACCACAATCTCCAATGCACACAAAGAGTTTGGCAACTCTTAAACATCAGTTGCTTCGTAACAGACTGATGATAACTGCTCGAAAAAGTATTAGTAAGAATGCCAGTTTAGGACAGTTATATGGAAATATGCAAGAAGTCTACCATCAAATGCAGACACCTCTTATTTACCAGGACCCCTCTGCTAGAGCACAGGGACTAAAAGAATTAAAAGAATCAACCATTCAAGCAGCTACCAGCATGGGAAACATGAACGCTCCCATAGATGAGAGTCTCTTTGATATTGAGAAAGAAATAGATGACCTGCTTCCTGTTGAGGTAAAGGAACAACGTCTCAGTAACTTGCTTCAAGCAGTAATGGTAGGAGGATGCGTTGCAGCCATGCCTGTCCTCAAGAAGATCCCAACCTCAGTCCTTTGGGGCTACTTTGCCTTCATGGCCATTGAAAGTTTGCCAGGAAACCAGTTTTGGGAAAGGATCCTATTACTCTTCACTGCACCAAGCAGGAGATATAAGGTGCTTGAGGATTACCATGCTACTTTTGTGGAAACAGTTCCTTTCAAGACAATAGCAACATTCACCATTTTCCAAACCATTTATCTTCTTATATGTTTTGGACTAACTTGGGTCCCTATTGCTGGGGTCATGTTTCCTTTGATGATCATGCTCTTAGTTCCATTAAGACAGTACTTTCTCCCCAAATTTTTTAAAGGGGCACATCTTCAAGACTTGGATGCAGCAGAGTATGAAGAGCAAACTGCTTTACCATACAACCTTGCAACACAATCTGAATTTGGAGCTGGTGCTTCTCATGCTGGAGAAGGTGAGATCCTAGATGAAGTTATCACTAGAAGCCGTGGTGAGTTTAGGCACACTAGCTGTAGTCCAAGGATCACAAGCTCCACTCCAACACCAGGAAATGATCCTAAGAGCCATCTAAGCCCACGTCTCTCTTTTAGTTCTCGCGCGGGTGAGCTCACCACTGAGCAAAGTCCTCGCTCTGGTGCAAGAGGTCACTATAGTCCAAAGGCCAGAGAAGTGAAATTATCAAATCTGGGAAGAAGTCCTCTTAACCCTGATTCAAAACAGCAGGACAACAAATAA 2175 0.4326 MEETFVPFEGIKNDLRGRLMCYKQDWTGGIRAGLRILAPTTYIFFASAIPVISFGEQLERNTDGVLTAVQTLVSTSICGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRDLFLAWTGWVCVWTALLLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQQAIKGLVDEFRIPGRENPKAVEFTTPWRFANGMFALVLSFGLLLTALRSRKARSWRYGSGWIRSLIADYGVPLMVLVWTGVSYIPSGNVPHGIPRRLFSPNPWSPGAYENWTVIKDMVHVPIVYIIGAFIPATMIAVLYYFDHSVASQLSQQKEFNLRKPSSYHYDLLLLGFLTLMCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLMITARKSISKNASLGQLYGNMQEVYHQMQTPLIYQDPSARAQGLKELKESTIQAATSMGNMNAPIDESLFDIEKEIDDLLPVEVKEQRLSNLLQAVMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIATFTIFQTIYLLICFGLTWVPIAGVMFPLMIMLLVPLRQYFLPKFFKGAHLQDLDAAEYEEQTALPYNLATQSEFGAGASHAGEGEILDEVITRSRGEFRHTSCSPRITSSTPTPGNDPKSHLSPRLSFSSRAGELTTEQSPRSGARGHYSPKAREVKLSNLGRSPLNPDSKQQDNK 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi182g00019 724 MobiDBLite consensus disorder prediction 645 724 - -
Sebi182g00019 724 FunFam probable boron transporter 2 18 60 - -
Sebi182g00019 724 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Sebi182g00019 724 Pfam HCO3- transporter family 201 373 IPR011531 GO:0006820|GO:0016020
Sebi182g00019 724 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Sebi182g00019 724 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
Sebi182g00019 724 Gene3D Helical hairpin bin 18 60 - -
Sebi182g00019 724 MobiDBLite consensus disorder prediction 649 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi182g00019 Sebi-Chr182 186483 189955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi182g00019 1 696 Antiporters AT3G62270 83.070 0.0 1175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi182g00019 K24194 - gmx:100776705 1329.69