Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi182g00001 ATGGAAGATGAACCTTTTCTGGGACTCGAGCGTTGCGATTTACCCTTCACCTCTTCCAAGTCCTTCAACGATGTTGTCACTTTACAAGAAGCCCCACGACCACAAGTTTCAGAAATAGAATCCTTCACTGAACCCCACCGGAACCCACCATTGCCTCCGAAGAAGAAACTCAGTCGCTGCAAAACCGCTCCTGCTATGGTTACCATGCGAGACCTCAAACCAAAGGAGAATTTGATCCTAACGGGTCTTCAAGTGGGTTCTAGAGAAGGTTTCTCTGCAAGGGATTATATAGTTGATGTGGCTAAGGGTAGGATGAGGATTAGATTGAAGGTTGGTTTGGCACTTGGGGTTGTGGTGCTTTGTATTGGGATTGGGAGTTTGGTGTTGTACTTTGTGGAGGGTTTGGATTGGGTTGATTCCATTTATTTATCAGTTATGTCTGTCACAACTGTTGGGTATGGGGATAGAGCCTTCAAGACCCTTCCGGAGGCAAGAATTGATAGGAGGCATAGGAGAATGGCCAAGAAAGTGTTGCAAAGAGAAATAACTGTGGAGGATTTGATTGCTGCTGATATCAACCACACTGGTTTTATCAGTAAATCAGAGTATGTGATCTTCAAGCTGAAAGAGATGGGTAAGATACGGGACAAGGATGTATTGCAAATTTGTGATCAATTCATGAAACTTGACCCTTCAAACTGCGGGAAGATAACATTACCTCATCTTTTGGAGGGTAGGTCATGA 744 0.4422 MEDEPFLGLERCDLPFTSSKSFNDVVTLQEAPRPQVSEIESFTEPHRNPPLPPKKKLSRCKTAPAMVTMRDLKPKENLILTGLQVGSREGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIGIGSLVLYFVEGLDWVDSIYLSVMSVTTVGYGDRAFKTLPEARIDRRHRRMAKKVLQREITVEDLIAADINHTGFISKSEYVIFKLKEMGKIRDKDVLQICDQFMKLDPSNCGKITLPHLLEGRS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi182g00001 247 ProSitePatterns EF-hand calcium-binding domain. 191 203 IPR018247 -
Sebi182g00001 247 Pfam Ion channel 119 159 IPR013099 -
Sebi182g00001 247 SUPERFAMILY Voltage-gated potassium channels 101 162 - -
Sebi182g00001 247 MobiDBLite consensus disorder prediction 37 57 - -
Sebi182g00001 247 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 75 158 IPR003280 GO:0005267|GO:0016020|GO:0071805
Sebi182g00001 247 SUPERFAMILY EF-hand 189 242 IPR011992 -
Sebi182g00001 247 Gene3D - 55 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi182g00001 Sebi-Chr182 7060 8931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi182g00001 72 243 Ion Channels AT4G01840 57.921 1.10e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi182g00001 K05389 - gmx:100780438 274.248