Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi181g00093 ATGGATCCTTCTCGGCGAACTCCCCGCGCCGTGATCGATCCCGTCCCCAAGTTCCGCCAAGTCGGGTTCTTCGCTCCCGGAGCCCCACCAGAGCGCTCTCAATCGGGTCCACCCGACCCGACTCACTCTGCCACTCCCGTCCCCGACATCTCTCCCTCCCTCTCGCCGGTGATGATCCCGCCGCCGCGCCACCTCTCTGACAACCTCCTCCTCCACTCTCGTCCCGCCGCATCAACTCTCCGTGCTGACTCCATTACCGTCGGCGGCAGCAACTACGACGCTCCAGTGTCACCAGCCCCGTCGTCTTCCTACTCCAGCAGGATCGCCGCCGTCGGTGATGGAAGCTTTTTTGCTGGCAGCGGTGGCAAGGGGAACGGTGCTGGAAAAGTGGCGGCGTCATCCTTTCCTCGCGGAGGATTCGACTTGACGGCGATGAAGGCGAGTATAGTTCCTGCCAGCGAATTGACCACTGTTTCCGTGGTGAATGATTCGCTTGGGATTCCCGAAAAAGAAAAGGCAAACAAAGGAGGAGGGTCAGCTGTGGAAGTCAAAGATCAACCTACTAGTTCAAAACAGCAGAAACCGAAAACCTCAAAAGCTGAAAGACGTGCTCTTCAAGAAGCTCAACGAGCAGCAAAGGCTGCTGCAAAAGCTGAAGGAAATAAGGCATCTGCAACTGCAACTTCAGTGAATGCAAAACCAGCTAAACCTGTAAAGCCTGCACAGAAAGTTGATAATGCAGCTGCAGCCCCTGAGAAGAAAGGGGGTGATTGTCCACCAGAAAAGGATAGAAAGAAAGATGCCCCTCAACCACGCATGCAGTATGATGACAAGAGTCGAGTGGAAAAAGCTAAACGCCGTTCTGTGGTGAAACAAACTGAAGCTAGGAGCAGAGTTGAGTTGTTCAGGCATTTACCACAATATGAACATGGGAGTCAGCTTCCAGATCTTGAGGCAAAGTTTTTCCATCTTCACCCTGTGCATTCTGCTGTTTATAAGGTGGGTTTGCAGTATCTGTCCGGAGATATATCTGGTGGCAATGCTCGTTGTATTGCAATGCTTCAAGCATTTCAAGAGGCCATCAAAGACTACAGTGTTCCACCTGAGAAGACTCTTGTGAGAGACTTAACAGCAAAAATTAGTAGTTATGTGTCATTTCTTATTGAGTGTCGTCCTCTGTCAATCAGCATGGGAAATGCAATTAGATTTCTCAAAAGTCGGATAGCCAAGCTACCTTTAGCCCTGTCCGAGTCAGAAGCAAAAAGTTCTCTCCAGTCAGATATTGAGCGTTTCATAAGTGAGAAGATTGTACTTGCCAGCAAGGTGATAGTCAAGCATGCTGTCACCAAAATAAGAGATGGTGATGTTCTTCTAACTTATGGGTCATCATCAGCAGTTGAAATGATTCTTTTGCATGCACATGAATTAGGAAAACAGTTTCGTGTTGTGGTAGTTGACTCGCGTCCAAAGCTTAGAGGGCAACTTTTACTTCGCAGGCTCGTGGAGAAAGGTCTTAGCTGTACATACACTCATATAAATGCTGTTTCCTACATAATGCATGAAGTCACTCGAGTTTTTCTGGGTGCTTCATCAGTGTTGTCTAATGGAACAGTATATTCAAGAGTTGGGAGTGCATGTGTTGCAATGGTTGCTCATGAATTCCATGTACCTGTCATAGTATGTTGTGAAGCCTATAAATTTCATGAAAGGGTACAACTGGATTCAATATGCTCGAATGAACTTGGTGATCCAGATGTCATTTCAAATGTTATGGGTAGAGAGGATATCAACTACTTGGATGGTCGGGCCGATATTGAAAATCTGCAACTTTTAAATCTAATTTATGATGCAACACCTTCGGATTATGTTTCAATGATAGTCACAGATTATGGCATGGTCCCACCCACAAGTGTGCCTGTAATTGTAAGAGAATATGGGAGAGAACAGGTCTGGATATAA 1959 0.4727 MDPSRRTPRAVIDPVPKFRQVGFFAPGAPPERSQSGPPDPTHSATPVPDISPSLSPVMIPPPRHLSDNLLLHSRPAASTLRADSITVGGSNYDAPVSPAPSSSYSSRIAAVGDGSFFAGSGGKGNGAGKVAASSFPRGGFDLTAMKASIVPASELTTVSVVNDSLGIPEKEKANKGGGSAVEVKDQPTSSKQQKPKTSKAERRALQEAQRAAKAAAKAEGNKASATATSVNAKPAKPVKPAQKVDNAAAAPEKKGGDCPPEKDRKKDAPQPRMQYDDKSRVEKAKRRSVVKQTEARSRVELFRHLPQYEHGSQLPDLEAKFFHLHPVHSAVYKVGLQYLSGDISGGNARCIAMLQAFQEAIKDYSVPPEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLALSESEAKSSLQSDIERFISEKIVLASKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGKQFRVVVVDSRPKLRGQLLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGSACVAMVAHEFHVPVIVCCEAYKFHERVQLDSICSNELGDPDVISNVMGREDINYLDGRADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGREQVWI 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi181g00093 652 SUPERFAMILY NagB/RpiA/CoA transferase-like 326 645 IPR037171 -
Sebi181g00093 652 MobiDBLite consensus disorder prediction 164 290 - -
Sebi181g00093 652 MobiDBLite consensus disorder prediction 31 45 - -
Sebi181g00093 652 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 51 649 - -
Sebi181g00093 652 Pfam Initiation factor 2 subunit family 343 635 IPR000649 GO:0044237
Sebi181g00093 652 MobiDBLite consensus disorder prediction 1 66 - -
Sebi181g00093 652 MobiDBLite consensus disorder prediction 255 290 - -
Sebi181g00093 652 MobiDBLite consensus disorder prediction 86 105 - -
Sebi181g00093 652 Gene3D - 439 645 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi181g00093 Sebi-Chr181 1439928 1444349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi181g00093 4 652 Eukaryotic Initiation Factors Gene Family AT5G38640 65.082 0.0 792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi181g00093 K03680 - gmx:100775998 991.49