Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi181g00092 ATGCCTAAACAGGACCCAAGTGGTGGTGGTGCTCACTATGGCATTTCCTGTTTGCTCACAAAGAAACCAGCAAAGAAAGATAGGCACAGCAAGATTTACACCTCTCAGGGTTTGAGAGACCGAAGGGTGAGGCTTTCCATTGAGATCGCTAGAAAGTTCTTTGATCTTCAAGACATTGAAACACCAAGAGATGACTTCAATGTTATAGAGGAATCCATTGTGATCAAGAGAAAGTTGAAGCCATCATTGATGTCTTCTTCTTCTTCTCATCATCACCATCACCAAAACATTGCAATCCCTAAGGAAGCAAGTTTCAACAATGACTTCCACTCCTTCCCCAATATGTCTCCAAATTGGGATGCTTCTAATGGTGCTGCCACTGCTCGCTCCAACTTCTGTGCAATAGCCAGCATGAATCTCTCAACAGGGCTTCAAATCTTTGGAAAGTCTTGGGAGGAGTGCACCAATCCACGTCTACACTAG 483 0.441 MPKQDPSGGGAHYGISCLLTKKPAKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDIETPRDDFNVIEESIVIKRKLKPSLMSSSSSHHHHHQNIAIPKEASFNNDFHSFPNMSPNWDASNGAATARSNFCAIASMNLSTGLQIFGKSWEECTNPRLH 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi181g00092 160 ProSiteProfiles TCP domain profile. 25 83 IPR017887 -
Sebi181g00092 160 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 58 IPR005333 GO:0003700
Sebi181g00092 160 Pfam TCP family transcription factor 24 58 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi181g00092 Sebi-Chr181 1394022 1395186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi181g00092 21 59 TCP Transcription Factor Family AT1G67260 79.487 1.98e-14 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sebi181g00092 TCP 2.3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi181g00092 - - cam:101499957 163.31