Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi181g00045 ATGAATGATGCTAGTGGGAAGGGTTCTTCTTGTTTGGCCATTACGGAGAAGAAGAATCAGAGGCCAGGTGGTTGCATTGGTATTTTCTTTCAGCTCTTTGATTGGAACCGTAGGCTCACTAAGAAGAGGCTCTTCTCCAAGAAACTTCTTCCTCCTGCTCGTGCAAACAAGCTTCTTCAAAGAAGTTTAAAGGAGATGAGAAAATGCCAAATTCCAAGCTCACCTGATGCTAATGAGAACAATGGAGGCTTCCCAAGTGCCAAAAAAGGTGGGAATCGTGTTATGGAGGTAGAACAGAAGCATGAAATGCGAGTTCCTGGTCTGGTTGCTAGGTTGATGGGTCTAGAATCTATTCCAGCTTCACAAAGAGATAGGACCAAAAATTCATCCTTTTCTGATGGGGAGGAGAAGGATTCTTTGGATGATCATAGTAGTGAGGGTGATAAGCAAAGGGTGGATTTGGAAATGGGAGTTGCAAATGCAAAGCATGATTCAAGACCTCAGAAGCTTCAGAAAACGGGGACATATGAGAGAAAGGCAGTGACAAGGTTTGGTGCTGAGGCAATGCAAATTAAAGTGTTTTGTCACAAGCCAGAGGTTGAGATCAGCACACCTATTGTTTCAGATGTTTTCACTGCCTCCTCATTGGGATCAGCACAGGAAGGAAGGCCATTTGTCCCTTCTCATGAAAATGATGTAGTTCTTTTGAGAAGCCAGGACAAGATTATAACTCTTGTTCATGAAGATGGAGAAAATAATGCTCATTCTTGTAATGAATCCACTACCAGAAGAATGCCTGTACCTTCTAAATGGGATTCGTCACGCCAACCATGTGGTGCGCTAGAGGATGATGAGGCATCTCTTTTGCCTTCAAACAGAAAAATCAAATACAAGAACGGAAGCCTAAGTGGTCGAACTAGGATGAGGTCTCCTACCAAGATGGATAGTTGCAAATTTGATCTTGAGAGAAAACCTCCTAATAGAAAGAATGATTCTTTATCTCGTAGAAATGTTAGTTCTGATGCACAGGGGGAAAAAGGAGGAGTTTTGATGCTTCTTCCCCAAACAAGTGGAAAGGAAGAGACAAGCAGTGATAATGAGAATAAGATTTATTTGCAAAGACCTCCACCCTTGAGAGCAGATGCTTTAGGTGCCATTCTAGAACAGAAGTTGAAGGAATTGGCTACTGGTGGTCCACCTAAAAAACCAACTGCCGTGATTCTTCAAGAACTGATATCTGCTCTTAAGTCAGAGCATCTAACATGTTCTGCTGATCATATGTTAAATGACAAGTTATCTGGTAATATTCAGTTCCTCATTTTCATTGTAGTCACTGTTGTTTATTTGACTTGA 1353 0.4169 MNDASGKGSSCLAITEKKNQRPGGCIGIFFQLFDWNRRLTKKRLFSKKLLPPARANKLLQRSLKEMRKCQIPSSPDANENNGGFPSAKKGGNRVMEVEQKHEMRVPGLVARLMGLESIPASQRDRTKNSSFSDGEEKDSLDDHSSEGDKQRVDLEMGVANAKHDSRPQKLQKTGTYERKAVTRFGAEAMQIKVFCHKPEVEISTPIVSDVFTASSLGSAQEGRPFVPSHENDVVLLRSQDKIITLVHEDGENNAHSCNESTTRRMPVPSKWDSSRQPCGALEDDEASLLPSNRKIKYKNGSLSGRTRMRSPTKMDSCKFDLERKPPNRKNDSLSRRNVSSDAQGEKGGVLMLLPQTSGKEETSSDNENKIYLQRPPPLRADALGAILEQKLKELATGGPPKKPTAVILQELISALKSEHLTCSADHMLNDKLSGNIQFLIFIVVTVVYLT 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi181g00045 450 MobiDBLite consensus disorder prediction 295 367 - -
Sebi181g00045 450 Pfam DUF761-associated sequence motif 98 124 IPR032795 -
Sebi181g00045 450 MobiDBLite consensus disorder prediction 128 149 - -
Sebi181g00045 450 MobiDBLite consensus disorder prediction 66 92 - -
Sebi181g00045 450 MobiDBLite consensus disorder prediction 116 149 - -
Sebi181g00045 450 MobiDBLite consensus disorder prediction 295 310 - -
Sebi181g00045 450 MobiDBLite consensus disorder prediction 253 279 - -
Sebi181g00045 450 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 254 426 - -
Sebi181g00045 450 MobiDBLite consensus disorder prediction 311 335 - -
Sebi181g00045 450 MobiDBLite consensus disorder prediction 255 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi181g00045 Sebi-Chr181 575779 578078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi181g00045 11 192 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 47.619 8.00e-34 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi181g00045 - - qsa:O6P43_009293 278.1