Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi181g00044 ATGAAAGCTGAAATGTTGGTTCAAGAAGTCAAGAGTGAGATTAAGAAGTGGGCATGCATGGTTGAGATGGTACCTGACCAAATAATAGAATGGGAGATGAGCCACTCCTTGGGGAAATGGACTGATTTTAATATTGAAGCATTTGAGGCTGGTGTTGATATAGATGGGGATGTACTTCAAATTTTGGTTGATGAAATTGTTGAAGACCTTGTAGATTCTAGGCAAGGCACCTTTTGA 237 0.3966 MKAEMLVQEVKSEIKKWACMVEMVPDQIIEWEMSHSLGKWTDFNIEAFEAGVDIDGDVLQILVDEIVEDLVDSRQGTF 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi181g00044 78 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 69 - -
Sebi181g00044 78 Pfam Domain of unknown function (DUF4378) 2 65 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi181g00044 Sebi-Chr181 574139 574375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi181g00044 4 75 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 40.278 4.91e-14 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi181g00044 - - aprc:113861902 133.265