Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi181g00011 ATGGAGGATATTGAACCTGATATAATTAAAAGGCACCCCCAGGCAGAAAGTGAATGTCCAATATCACTTCAGGAGAGTCAGAACCCCAAGGATTCTGCTGTTGCAGACAGTAACAAGGTCATTGACAAAGAGAATCAGTGTACAAGCCCAAATGTTGGCATCGATGAATGTCAGACCTCAAATATTTCCCATGATGACAAATTACATATTGATGTCTGTGATGAACAGCTGTGTCAGAACCCCAATGCTACATTTATATCTATGACCGATACTGATGTAGAAAATGAGGAATTATATGTGGCTCCAGAGATTGGAATGGAGTTTGAATCAGAAGATCATGCTTACAAGTGTTATAGCAAGTATGCTGTTCTCAATGGTTTCAGCATAAGAAAGGATTTTGTCAACAAAAGTAAGATAGATGGTGCAGTGGTGTCCAGAAGATACACCTGCCACAGACAGGGTTATCGTCCTAACAGAAATGGTACATACATAAGGAAATTCCAGCATGAAACAAGGACTGGTTGCTTAGCACATATGACTATCGGTCGTCAGCCAAAGGGCAAGTTTCGTGTCACTAGTTTTGAAAGAGAGCACAATCATGAGTTTGTAACACCCTGTACTGCTCATATGTTACCATCACAGAAAAGATTGAGTTTTGCTCAAGCTGTTGAAGCGAACATAACTGAGTCCAGGTTGGATGGGGTACCAAAACTGGGAATGGGATTTGACTCAGAGGAGCATGCATATGAATTTTATAATACATATGCTGGACGTGTAGGTTTCAGTGTAAGAAAAGATTATGTAAATAGGAGTAAAGTTGATGGTGCTGTAGCATCTAGAAGGTTTACTTGCTTCAGAGAAGGTTTTCGGCAGAAAGACAAGCGGGATATGAATGTAAAGAGACCTCGGAAGGAAACACGGATTGGGTGTTTGGCACAATTGGTTATTTCTCGACAACCTGACGGTAGGTATCATGTAACTCACTTTGAAGAAAAGCATAATCATGAGCTTGTTGCTGCATGTAGAGCTCATATGTTGAGGTCACAGAAGAGGTTAGCTGCAACCGAAGTTGAAAACAACCTTGAAGATGGACCCAATATGCTGCCTAAGTCAGTCTCTGAATCCAATTGCAGGACTGTTGAAGATGCCCTCAAGCAACTGAGCCATATGTCTGTTGAATCTGGTTCTTTTGTAAATGATTTGAGCAGCTGCTTTTTTGATCATGAAGAGGAGGAGGATTTTGTTAATGTGTGGAATACTCTCCTGGACACTTATAATCTGTGGGAAAATGAATGTTTGCGTCAAATATATGAAAGCAGAGACCAATGGGCCATAGCATATGGAAGACATATTTTTTGTGCTGACATAGCTAACATACTACTGAGAGAAAACCTTACTGGAAACCTGAAAAAGCACCTAAAGGATGACTCAGATGTTCTTCCATTTCTCAAGCATCTTGCAAAGGTGGTGACTGATTGGCACTACAAAGAATTACAAGCCAATTATGACATGAGCCAGCGTATGCCAGCCCTGATGGGCGATGTCATTACGTTAAAGCATGCAAGAGATACATACACACCAAAGATGTTTGAGTTATTCCAGAAAGAATATGAAGCATCTTTAAATCTAGTCATAAATCATTGCACTGAGAATGGGTCATTGTTTAATTATAAAGTAAGCATATATGAACAGGTACGGGAGTATTCAGTTTCTTTTGATTCATCTAATGAGACAATCAGTTGCAGCTGTATGAAATTCGAGTATGTGGGAGTCTTATGCAGCCATGCATTAAAAGTTCTTGATTATAGGAACATAAGGATAGTTCCATCCCAGTACATCTTAAAGAGATGGACTAAAGATGCTAGAGTTTGA 1872 0.3985 MEDIEPDIIKRHPQAESECPISLQESQNPKDSAVADSNKVIDKENQCTSPNVGIDECQTSNISHDDKLHIDVCDEQLCQNPNATFISMTDTDVENEELYVAPEIGMEFESEDHAYKCYSKYAVLNGFSIRKDFVNKSKIDGAVVSRRYTCHRQGYRPNRNGTYIRKFQHETRTGCLAHMTIGRQPKGKFRVTSFEREHNHEFVTPCTAHMLPSQKRLSFAQAVEANITESRLDGVPKLGMGFDSEEHAYEFYNTYAGRVGFSVRKDYVNRSKVDGAVASRRFTCFREGFRQKDKRDMNVKRPRKETRIGCLAQLVISRQPDGRYHVTHFEEKHNHELVAACRAHMLRSQKRLAATEVENNLEDGPNMLPKSVSESNCRTVEDALKQLSHMSVESGSFVNDLSSCFFDHEEEEDFVNVWNTLLDTYNLWENECLRQIYESRDQWAIAYGRHIFCADIANILLRENLTGNLKKHLKDDSDVLPFLKHLAKVVTDWHYKELQANYDMSQRMPALMGDVITLKHARDTYTPKMFELFQKEYEASLNLVINHCTENGSLFNYKVSIYEQVREYSVSFDSSNETISCSCMKFEYVGVLCSHALKVLDYRNIRIVPSQYILKRWTKDARV 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi181g00011 623 SMART 26again6 579 606 IPR006564 GO:0008270
Sebi181g00011 623 MobiDBLite consensus disorder prediction 19 34 - -
Sebi181g00011 623 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 92 221 IPR031052 GO:0006355
Sebi181g00011 623 Pfam SWIM zinc finger 557 603 IPR007527 GO:0008270
Sebi181g00011 623 MobiDBLite consensus disorder prediction 1 34 - -
Sebi181g00011 623 Pfam FAR1 DNA-binding domain 250 338 IPR004330 -
Sebi181g00011 623 Pfam FAR1 DNA-binding domain 118 203 IPR004330 -
Sebi181g00011 623 ProSiteProfiles Zinc finger SWIM-type profile. 568 604 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi181g00011 Sebi-Chr181 105033 107417 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi181g00011 FAR1 1.2e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi181g00011 K17604 - gmx:102659753 602.053